Factsheet for TraesCS2A01G043800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G043600.1	Wheat	nucleus	86.15	92.06
TraesCS2B01G056300.1	Wheat	nucleus	86.49	91.1
TraesCS2D01G042700.1	Wheat	nucleus	86.49	87.37
TraesCS2A01G043700.1	Wheat	nucleus	59.12	64.34
HORVU2Hr1G006600.1	Barley	nucleus	67.23	61.99
TraesCS1A01G300900.1	Wheat	nucleus	50.68	48.54
TraesCS1A01G301100.1	Wheat	plastid	47.97	46.86
Os05t0478400-00	Rice	nucleus	40.88	33.8
TraesCS3A01G343700.1	Wheat	nucleus	30.74	33.46
TraesCS3A01G343900.1	Wheat	nucleus	30.74	33.33
PGSC0003DMT400021625	Potato	nucleus	16.22	22.02
PGSC0003DMT400070939	Potato	nucleus	15.88	21.08
TraesCS1A01G410700.1	Wheat	nucleus	17.57	21.05
KRH16921	Soybean	nucleus	16.89	20.83
KRH09521	Soybean	nucleus	18.58	20.75
KRH00435	Soybean	nucleus	20.61	20.4
KRH40720	Soybean	nucleus	20.61	20.33
TraesCS3A01G343000.1	Wheat	nucleus	17.23	19.62
TraesCS1A01G410500.1	Wheat	nucleus	16.55	19.37
TraesCS2A01G161500.1	Wheat	nucleus	19.26	19.26
TraesCS1A01G410600.1	Wheat	nucleus	14.53	18.45
TraesCS2A01G489500.1	Wheat	nucleus	18.24	18.37
GSMUA_Achr5P07490_001	Banana	endoplasmic reticulum	20.61	18.21
TraesCS4A01G193600.1	Wheat	nucleus	13.51	18.02
KRH64216	Soybean	nucleus	19.26	17.98
KRH53716	Soybean	nucleus	19.26	17.87
KRH21928	Soybean	nucleus	16.22	17.78
TraesCS4A01G135000.1	Wheat	nucleus	15.2	17.72
KRH16920	Soybean	nucleus	17.91	17.49
TraesCS1A01G301000.1	Wheat	nucleus	16.89	17.42
KRH21925	Soybean	nucleus	17.23	17.35
KRH21926	Soybean	nucleus	17.23	17.23
Solyc09g015770.2.1	Tomato	extracellular, nucleus	16.89	17.18
TraesCS3A01G343100.1	Wheat	nucleus	15.2	16.98
VIT_13s0067g03140.t01	Wine grape	nucleus	17.91	16.93
TraesCS5A01G185600.1	Wheat	nucleus	19.59	16.91
PGSC0003DMT400075091	Potato	nucleus	16.55	16.72
PGSC0003DMT400053122	Potato	nucleus	15.54	16.61
TraesCS1A01G301200.1	Wheat	nucleus	16.22	16.55
Solyc03g095770.2.1	Tomato	nucleus	15.2	16.48
TraesCS2A01G104900.1	Wheat	nucleus	18.58	16.32
TraesCS7A01G338500.1	Wheat	nucleus, plastid	19.93	16.08
TraesCS4A01G128100.1	Wheat	nucleus	11.15	16.02
TraesCS3A01G343600.1	Wheat	nucleus	17.23	15.84
TraesCS5A01G185700.1	Wheat	nucleus	18.58	15.76
KRH64882	Soybean	nucleus	12.5	15.74
VIT_08s0058g01390.t01	Wine grape	nucleus	18.92	15.69
Bra007243.1-P	Field mustard	nucleus	14.53	15.58
CDY27218	Canola	nucleus	14.53	15.58
TraesCS2A01G104800.1	Wheat	nucleus	18.24	15.43
TraesCS7A01G116000.1	Wheat	nucleus	19.59	15.38
KRH21927	Soybean	nucleus	15.54	15.33
CDX72140	Canola	nucleus	14.19	15.22
Bra000203.1-P	Field mustard	nucleus	17.23	15.0
CDY35441	Canola	nucleus	17.23	15.0
KRH16918	Soybean	nucleus	16.55	14.89
CDY22474	Canola	nucleus	16.89	14.71
AT3G56400.1	Thale cress	nucleus	14.53	14.63
CDX75992	Canola	nucleus	13.85	14.39
Bra014692.1-P	Field mustard	nucleus	13.85	14.39
CDY66845	Canola	nucleus	13.85	14.29
CDX79972	Canola	nucleus	15.88	13.95
TraesCS2A01G497400.1	Wheat	nucleus	16.89	13.89
Bra004586.1-P	Field mustard	nucleus	15.88	13.86
CDY23883	Canola	nucleus	15.88	13.86
CDX67645	Canola	nucleus	13.18	13.78
Bra003239.1-P	Field mustard	nucleus	13.18	13.78
TraesCS3A01G343500.1	Wheat	nucleus	16.55	13.65
CDY32013	Canola	nucleus	12.84	13.43
Bra016974.1-P	Field mustard	nucleus	14.86	13.33
CDY06967	Canola	nucleus	14.86	13.33
CDY14738	Canola	nucleus	14.53	13.03
AT2G40750.1	Thale cress	nucleus	15.2	13.01
TraesCS6A01G080500.1	Wheat	nucleus	14.86	11.25

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31282	PANTHER:PTHR31282:SF10	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS2A01G043800	EnsemblPlants:TraesCS2A01G043800.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2A:-:17481255..17482253

Molecular Weight (calculated)

32454.8 Da

IEP (calculated)

6.310

GRAVY (calculated)

-0.591

Length

296 amino acids

Sequence
(BLAST)

001: MRSHRGRKQP SCRGEDMAAL VTPAARVSEL MAQGRKSAAA LEALLQVQDD HAGIREITAE ILCCGDRALA ALDGKPGRKK RKLGPHGAAA LTTRPKRTRT
101: TSGETAAATR VERKQNWDDG FVWTKYGQKD IRGSDHPRHY FRCADYTLDA GGCPARRQVQ RSEEQDPPLY VLTYFADHTC CHGAEAAFAA LDDVKILDFG
201: SVGSRSPRPD DGDAPSGKTS RSEELPAEVA KVESTPLPDM RPAGKVAELS SSTDDIHYCS SSWESAAVCC DWDFFGNCSF DYVSEFFDVE DIALYR

Best Arabidopsis Sequence Match ( AT5G01900.1 )
(BLAST)

001: MNSCQQKAME KLLHGHGCAN QLLIMDQTES DSSMEREDLA KSVLHCFSDA LSILIDTNDH QDDQSNNSSP QDSSPVLESS RKPLHKRGRK TSMAESSDYH
101: RHESSTPIYH DGFLWRKYGQ KQIKESEYQR SYYKCAYTKD QNCEAKKQVQ KIQHNPPLYS TTYFGQHICQ LHQAYATFPI DTSDFEEHEG SHMIRFGHPN
201: ISFSSSTSNL RQHQNHQDRI KDEYMKPVIA EDWSPSQWMS SEVALAVEAF EFNPFWTSHD LSS

Arabidopsis Description

WRKY62WRKY62 [Source:UniProtKB/TrEMBL;Acc:A0A178U8T9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.