Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G375300.1 | Wheat | nucleus | 98.11 | 98.11 |
| TraesCS3D01G337100.1 | Wheat | nucleus | 94.34 | 93.63 |
| HORVU3Hr1G080890.1 | Barley | nucleus, plastid, vacuole | 82.64 | 74.49 |
| Os01t0820700-00 | Rice | nucleus | 71.7 | 67.14 |
| EES01667 | Sorghum | nucleus | 57.74 | 57.95 |
| Zm00001d043063_P001 | Maize | nucleus | 54.34 | 54.75 |
| TraesCS4A01G128100.1 | Wheat | nucleus | 18.87 | 24.27 |
| TraesCS3A01G343000.1 | Wheat | nucleus | 20.38 | 20.77 |
| TraesCS4A01G193600.1 | Wheat | nucleus | 17.36 | 20.72 |
| TraesCS2A01G161500.1 | Wheat | nucleus | 20.75 | 18.58 |
| TraesCS1A01G301000.1 | Wheat | nucleus | 19.62 | 18.12 |
| TraesCS1A01G410700.1 | Wheat | nucleus | 16.6 | 17.81 |
| TraesCS3A01G343900.1 | Wheat | nucleus | 18.11 | 17.58 |
| TraesCS5A01G185600.1 | Wheat | nucleus | 22.64 | 17.49 |
| TraesCS3A01G343700.1 | Wheat | nucleus | 17.74 | 17.28 |
| TraesCS5A01G185700.1 | Wheat | nucleus | 22.64 | 17.19 |
| TraesCS1A01G410600.1 | Wheat | nucleus | 15.09 | 17.17 |
| TraesCS1A01G410500.1 | Wheat | nucleus | 16.23 | 17.0 |
| TraesCS2A01G043600.1 | Wheat | nucleus | 17.36 | 16.61 |
| TraesCS1A01G301200.1 | Wheat | nucleus | 18.11 | 16.55 |
| TraesCS1A01G301100.1 | Wheat | plastid | 18.87 | 16.5 |
| TraesCS3A01G343600.1 | Wheat | nucleus | 20.0 | 16.46 |
| TraesCS1A01G300900.1 | Wheat | nucleus | 18.87 | 16.18 |
| TraesCS2A01G104900.1 | Wheat | nucleus | 20.38 | 16.02 |
| TraesCS2A01G043700.1 | Wheat | nucleus | 16.23 | 15.81 |
| TraesCS2A01G104800.1 | Wheat | nucleus | 20.75 | 15.71 |
| TraesCS4A01G135000.1 | Wheat | nucleus | 14.72 | 15.35 |
| TraesCS2A01G489500.1 | Wheat | nucleus | 16.98 | 15.31 |
| TraesCS2A01G043800.1 | Wheat | nucleus | 16.98 | 15.2 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 21.13 | 14.85 |
| TraesCS2A01G497400.1 | Wheat | nucleus | 20.0 | 14.72 |
| TraesCS3A01G343500.1 | Wheat | nucleus | 19.25 | 14.21 |
| TraesCS6A01G080500.1 | Wheat | nucleus | 17.74 | 12.02 |
| TraesCS7A01G338500.1 | Wheat | nucleus, plastid | 16.6 | 11.99 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31282 | PANTHER:PTHR31282:SF29 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS3A01G343100 | EnsemblPlants:TraesCS3A01G343100.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3A:+:590230585..590235511
Molecular Weight (calculated)
29482.6 Da
IEP (calculated)
5.941
GRAVY (calculated)
-0.941
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPPPKGES FDFEDPRAQE AMGSASASYS APGGVFGLSP PESSRRDSRK RRKDRPSWVK HTFTPHFDGH LWRKYGQKNI KDSVFPRLYY RCSYREDKQC
101: LASKLVQQEN HEDPPLFKVT YTYEHTCNTA PVPTPDVVAE LPAPATGDAL FLRFDSTGAG HRDAHRMEQE RHYQQPAAPG WPSMMLSFDS NSQQHEQCTF
201: PSELPPAASS SSFSTEGLPA PPSTTDGGGD GFSTWDSLRY GLNDHVHFGD NSYLPNSGND GDDNY
101: LASKLVQQEN HEDPPLFKVT YTYEHTCNTA PVPTPDVVAE LPAPATGDAL FLRFDSTGAG HRDAHRMEQE RHYQQPAAPG WPSMMLSFDS NSQQHEQCTF
201: PSELPPAASS SSFSTEGLPA PPSTTDGGGD GFSTWDSLRY GLNDHVHFGD NSYLPNSGND GDDNY
001: MMMEEKLVIN ELELGKELAN RLMNNLKHTS SVDSNKTLIS DILRIYQNAI FMLSFNQDKN ILKRSLEIDG KDSKNVFKKR KVSEKNTEKV KVFVATEQEN
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
Arabidopsis Description
WRKY46Probable WRKY transcription factor 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKD9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.