Factsheet for Zm00001d043063_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01667	Sorghum	nucleus	86.31	85.98
TraesCS3A01G343100.1	Wheat	nucleus	54.75	54.34
TraesCS3B01G375300.1	Wheat	nucleus	54.75	54.34
TraesCS3D01G337100.1	Wheat	nucleus	53.23	52.43
Os01t0820700-00	Rice	nucleus	55.13	51.24
HORVU3Hr1G080890.1	Barley	nucleus, plastid, vacuole	48.29	43.2
Zm00001d028962_P001	Maize	nucleus	17.49	21.5
Zm00001d021581_P001	Maize	cytosol, mitochondrion, nucleus	9.13	20.51
Zm00001d043066_P001	Maize	nucleus	18.63	20.42
Zm00001d052357_P001	Maize	nucleus	17.49	20.18
Zm00001d010617_P001	Maize	nucleus	22.43	18.61
Zm00001d010616_P001	Maize	nucleus, plastid	15.59	17.98
Zm00001d043060_P001	Maize	nucleus	18.63	17.13
Zm00001d050247_P001	Maize	nucleus	20.53	16.88
Zm00001d020137_P001	Maize	nucleus	19.77	16.05
Zm00001d005622_P001	Maize	nucleus	19.77	15.71
Zm00001d032265_P001	Maize	nucleus	19.39	15.32
Zm00001d011496_P002	Maize	nucleus	19.01	15.29
Zm00001d012505_P001	Maize	nucleus	15.21	15.15
Zm00001d009619_P002	Maize	nucleus	17.11	15.15
Zm00001d012508_P001	Maize	mitochondrion	13.31	14.77
Zm00001d043062_P001	Maize	nucleus	18.25	14.41
Zm00001d044010_P001	Maize	nucleus	18.25	14.33
Zm00001d020136_P001	Maize	nucleus	15.97	13.91
Zm00001d047523_P001	Maize	nucleus	17.11	13.85
Zm00001d045283_P001	Maize	nucleus	20.15	13.38
Zm00001d052355_P001	Maize	nucleus	19.01	13.37
Zm00001d005057_P001	Maize	nucleus	17.49	13.14
Zm00001d012507_P001	Maize	nucleus	16.73	12.5
Zm00001d022437_P001	Maize	mitochondrion, nucleus	15.97	12.43
Zm00001d036244_P001	Maize	nucleus	17.11	12.3
Zm00001d037854_P001	Maize	extracellular	18.63	11.98
Zm00001d023616_P001	Maize	plastid	16.73	11.55
Zm00001d023615_P001	Maize	plastid	16.73	11.55

Protein Annotations

EntrezGene:103651063	MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A1D6N886	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	ProteinID:ONM36798.1
PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF29	SMART:SM00774	SUPFAM:SSF118290
UniParc:UPI0002218393	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d043063	EnsemblPlants:Zm00001d043063_P001	EnsemblPlants:Zm00001d043063_T001
SEG:seg	:	:	:	:	:

Description

WRKY-transcription factor 41Probable WRKY transcription factor 30

Coordinates

chr3:-:187943172..187952706

Molecular Weight (calculated)

29687.8 Da

IEP (calculated)

5.130

GRAVY (calculated)

-0.939

Length

263 amino acids

Sequence
(BLAST)

001: MKREQSLSFE FGDPSAQDAM GSASESSYSY SPPGGAVFGL SPPESSPRSG RNNNRRRDRP SWVRLTDTPY FDGHLWRKYG QKKIKDAEYP RLYFRCSYRE
101: DRHCLASKLL QQKNDDDPPL YEVTYTYEHT CGAPPVSFPD IVAEPPVSTD GLVLRFDSPS SDAWMQQNGR YHSTSRSAFM MLSFGSSSQT HDQQPAVFRS
201: DLEAGLSSFP TEGLPPAPPP ANDDDGDMLS KLNSFAYDFD NQMHFGDHTY LPHNSSNYDH DDH

Best Arabidopsis Sequence Match ( AT5G01900.1 )
(BLAST)

001: MNSCQQKAME KLLHGHGCAN QLLIMDQTES DSSMEREDLA KSVLHCFSDA LSILIDTNDH QDDQSNNSSP QDSSPVLESS RKPLHKRGRK TSMAESSDYH
101: RHESSTPIYH DGFLWRKYGQ KQIKESEYQR SYYKCAYTKD QNCEAKKQVQ KIQHNPPLYS TTYFGQHICQ LHQAYATFPI DTSDFEEHEG SHMIRFGHPN
201: ISFSSSTSNL RQHQNHQDRI KDEYMKPVIA EDWSPSQWMS SEVALAVEAF EFNPFWTSHD LSS

Arabidopsis Description

WRKY62WRKY62 [Source:UniProtKB/TrEMBL;Acc:A0A178U8T9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.