Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d028962_P001 | Maize | nucleus | 79.49 | 43.46 |
| EER94940 | Sorghum | nucleus | 82.91 | 43.11 |
| Os03t0321700-01 | Rice | nucleus | 62.39 | 34.76 |
| TraesCS4B01G176700.1 | Wheat | nucleus | 58.97 | 33.5 |
| TraesCS4D01G178400.1 | Wheat | nucleus | 58.97 | 33.5 |
| HORVU4Hr1G052010.2 | Barley | nucleus | 58.12 | 33.01 |
| TraesCS4A01G128100.1 | Wheat | nucleus | 58.12 | 33.01 |
| HORVU4Hr1G051970.1 | Barley | nucleus | 32.48 | 30.4 |
| Zm00001d052357_P001 | Maize | nucleus | 29.91 | 15.35 |
| Zm00001d043063_P001 | Maize | nucleus | 20.51 | 9.13 |
| Zm00001d043066_P001 | Maize | nucleus | 17.95 | 8.75 |
| Zm00001d012508_P001 | Maize | mitochondrion | 17.09 | 8.44 |
| Zm00001d043062_P001 | Maize | nucleus | 19.66 | 6.91 |
| Zm00001d010616_P001 | Maize | nucleus, plastid | 12.82 | 6.58 |
| Zm00001d020137_P001 | Maize | nucleus | 17.95 | 6.48 |
| Zm00001d010617_P001 | Maize | nucleus | 17.09 | 6.31 |
| Zm00001d043060_P001 | Maize | nucleus | 15.38 | 6.29 |
| Zm00001d050247_P001 | Maize | nucleus | 17.09 | 6.25 |
| Zm00001d047523_P001 | Maize | nucleus | 17.09 | 6.15 |
| Zm00001d012505_P001 | Maize | nucleus | 13.68 | 6.06 |
| Zm00001d045283_P001 | Maize | nucleus | 20.51 | 6.06 |
| Zm00001d005622_P001 | Maize | nucleus | 17.09 | 6.04 |
| Zm00001d036244_P001 | Maize | nucleus | 18.8 | 6.01 |
| Zm00001d032265_P001 | Maize | nucleus | 17.09 | 6.01 |
| Zm00001d020136_P001 | Maize | nucleus | 15.38 | 5.96 |
| Zm00001d022437_P001 | Maize | mitochondrion, nucleus | 17.09 | 5.92 |
| Zm00001d009619_P002 | Maize | nucleus | 14.53 | 5.72 |
| Zm00001d044010_P001 | Maize | nucleus | 16.24 | 5.67 |
| Zm00001d011496_P002 | Maize | nucleus | 15.38 | 5.5 |
| Zm00001d005057_P001 | Maize | nucleus | 16.24 | 5.43 |
| Zm00001d052355_P001 | Maize | nucleus | 16.24 | 5.08 |
| Zm00001d012507_P001 | Maize | nucleus | 14.53 | 4.83 |
| Zm00001d023616_P001 | Maize | plastid | 14.53 | 4.46 |
| Zm00001d023615_P001 | Maize | plastid | 14.53 | 4.46 |
| Zm00001d037854_P001 | Maize | extracellular | 15.38 | 4.4 |
Protein Annotations
| MapMan:35.2 | UniProt:A0A1D6ICH8 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | ProteinID:ONM57569.1 | PFAM:PF03106 | PANTHER:PTHR31282 |
| PANTHER:PTHR31282:SF13 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI000220C1E9 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| EnsemblPlantsGene:Zm00001d021581 | EnsemblPlants:Zm00001d021581_P001 | EnsemblPlants:Zm00001d021581_T001 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7:+:156805102..156805455
Molecular Weight (calculated)
12226.0 Da
IEP (calculated)
4.899
GRAVY (calculated)
-0.354
Length
117 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCPATKQVQ QKDHNDPPLY AVTYYSDHSC NSAFLPLFPS EFQLRTPSGK AVSICFDSSS GAPAQEPAAV ASVATNASGG SPSSSAAAAR RGTPPDISYP
101: LDLRWSDTYP WGAGAVD
101: LDLRWSDTYP WGAGAVD
001: MNSCQQKAME KLLHGHGCAN QLLIMDQTES DSSMEREDLA KSVLHCFSDA LSILIDTNDH QDDQSNNSSP QDSSPVLESS RKPLHKRGRK TSMAESSDYH
101: RHESSTPIYH DGFLWRKYGQ KQIKESEYQR SYYKCAYTKD QNCEAKKQVQ KIQHNPPLYS TTYFGQHICQ LHQAYATFPI DTSDFEEHEG SHMIRFGHPN
201: ISFSSSTSNL RQHQNHQDRI KDEYMKPVIA EDWSPSQWMS SEVALAVEAF EFNPFWTSHD LSS
101: RHESSTPIYH DGFLWRKYGQ KQIKESEYQR SYYKCAYTKD QNCEAKKQVQ KIQHNPPLYS TTYFGQHICQ LHQAYATFPI DTSDFEEHEG SHMIRFGHPN
201: ISFSSSTSNL RQHQNHQDRI KDEYMKPVIA EDWSPSQWMS SEVALAVEAF EFNPFWTSHD LSS
Arabidopsis Description
WRKY62WRKY62 [Source:UniProtKB/TrEMBL;Acc:A0A178U8T9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.