Factsheet for TraesCS1B01G311000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G301200.1	Wheat	nucleus	97.22	96.55
TraesCS1D01G300900.1	Wheat	nucleus	94.1	93.45
HORVU1Hr1G069610.1	Barley	nucleus	92.71	92.39
HORVU0Hr1G023420.1	Barley	nucleus, plastid	92.71	85.58
TraesCS1B01G310900.1	Wheat	nucleus	73.96	74.48
EES19695	Sorghum	nucleus	51.39	62.98
Zm00001d010616_P001	Maize	nucleus, plastid	49.65	62.72
Os05t0478700-00	Rice	nucleus	51.04	52.5
TraesCS4B01G176700.1	Wheat	nucleus	14.93	20.87
TraesCS3B01G375200.1	Wheat	nucleus	18.4	20.78
TraesCS4B01G121500.1	Wheat	nucleus	15.62	20.27
TraesCS3B01G375300.1	Wheat	nucleus	16.67	18.11
TraesCS2B01G056300.1	Wheat	nucleus	17.36	17.79
TraesCS3B01G375600.1	Wheat	nucleus	19.1	17.08
TraesCS1B01G440700.1	Wheat	nucleus	14.24	17.01
TraesCS1B01G440500.1	Wheat	nucleus	15.28	16.86
TraesCS7B01G249700.1	Wheat	nucleus	15.97	16.79
TraesCS2B01G187500.1	Wheat	nucleus	16.67	16.38
TraesCS4B01G170100.1	Wheat	nucleus	17.01	16.23
TraesCS5B01G183700.1	Wheat	nucleus	19.1	16.22
TraesCS5B01G183800.1	Wheat	nucleus	19.44	16.18
TraesCS2B01G056400.1	Wheat	nucleus, plastid	15.97	15.97
TraesCS1B01G440600.1	Wheat	nucleus	13.19	15.97
TraesCS3B01G375700.1	Wheat	nucleus	14.93	15.81
TraesCS3B01G375800.1	Wheat	nucleus	14.58	15.61
TraesCS1B01G440300.1	Wheat	nucleus	12.85	15.1
TraesCS2B01G121800.1	Wheat	nucleus	17.01	14.12
TraesCS2B01G517400.1	Wheat	nucleus	13.89	13.47
TraesCS7B01G012600.1	Wheat	nucleus	16.32	12.67
TraesCS1B01G243100.1	Wheat	nucleus	15.62	12.53
TraesCS2B01G121900.1	Wheat	nucleus	16.32	12.37
TraesCS6B01G108000.1	Wheat	nucleus	16.32	11.99

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31282	PANTHER:PTHR31282:SF24	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS1B01G311000	EnsemblPlants:TraesCS1B01G311000.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1B:-:534171197..534173981

Molecular Weight (calculated)

32173.3 Da

IEP (calculated)

5.672

GRAVY (calculated)

-0.789

Length

288 amino acids

Sequence
(BLAST)

001: MAMRPMSEMS PPPAPSDQRD AVIEELRKGS QLAEFLRQQV ELIPEDSRRD AALANVSDIT TALASSLSVL QSEREQYYCS SSSSDAGHAS GASGGGGVRN
101: GVVARTRNRK AKHRRGTYGE ELPIKEILTK APENDRFHWR KYGEKKILHA DFPRLYYRCG YSDEHKCPAK KYVQQQNSSD PPMFLVTLIN DHTCDTLFPD
201: EDQDQPPSSS SSANNSQMLD FSKASLSSAV GVSRLKEEED ADMSVTVPSY NYTYDELSSS SLPFLSPKQW EMEMEVKSLF RRHSGDGN

Best Arabidopsis Sequence Match ( AT2G40740.1 )
(BLAST)

001: MYSYKKISYQ MEEVMSMIFH GMKLVKSLES SLPEKPPESL LTSLDEIVKT FSDANERLKM LLEIKNSETA LNKTKPVIVS VANQMLMQME PGLMQEYWLR
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS

Arabidopsis Description

WRKY55WRKY DNA-binding protein 55 [Source:TAIR;Acc:AT2G40740]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.