Factsheet for GSMUA_Achr11P13500_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr1P27980_001
GSMUA_Achr3P15840_001
GSMUA_Achr3P25080_001
GSMUA_Achr4P15640_001
GSMUA_Achr6P05710_001
GSMUA_Achr7P14140_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G08500.1	GSMUA_Achr10P...	AT4G23810.1	17587183
AT4G08500.1	GSMUA_Achr1P27980_001	AT4G23810.1	17587183
AT4G08500.1	GSMUA_Achr3P15840_001	AT4G23810.1	17587183
AT4G08500.1	GSMUA_Achr3P25080_001	AT4G23810.1	17587183
AT4G08500.1	GSMUA_Achr4P15640_001	AT4G23810.1	17587183
AT4G08500.1	GSMUA_Achr6P05710_001	AT4G23810.1	17587183
AT4G08500.1	GSMUA_Achr7P14140_001	AT4G23810.1	17587183
AT4G08500.1	GSMUA_AchrUn_...	AT4G23810.1	17587183

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU91136	Sorghum	cytosol	49.72	73.05
GSMUA_Achr1P12210_001	Banana	mitochondrion	71.74	67.65
PGSC0003DMT400067237	Potato	cytosol	35.96	67.35
GSMUA_Achr10P...	Banana	cytosol	64.22	66.67
GSMUA_Achr2P07690_001	Banana	nucleus	69.36	65.17
GSMUA_Achr7P11850_001	Banana	mitochondrion, nucleus	64.4	63.36
Bra039693.1-P	Field mustard	cytosol	31.19	62.04
VIT_12s0142g00700.t01	Wine grape	cytosol	28.81	59.47
Zm00001d033655_P003	Maize	nucleus, plastid	65.87	59.05
CDY36607	Canola	cytosol	34.86	57.75
Zm00001d013477_P008	Maize	plastid	64.77	57.59
KRH10459	Soybean	cytosol	45.5	56.36
TraesCS4D01G038900.1	Wheat	plastid	66.06	56.07
Os03t0703400-01	Rice	plasma membrane	66.79	55.66
TraesCS4A01G272500.1	Wheat	plastid	66.24	54.7
HORVU4Hr1G006660.1	Barley	plastid	66.24	54.53
CDY24072	Canola	cytosol	35.6	54.49
EER92515	Sorghum	cytosol, plastid	60.37	54.47
Os03t0262200-00	Rice	cytosol, plastid	59.45	54.27
TraesCS4B01G216700.1	Wheat	cytosol, plastid	58.53	53.98
TraesCS4D01G217000.1	Wheat	plastid	58.53	53.89
TraesCS4B01G041600.1	Wheat	plastid	65.5	53.6
VIT_12s0034g00750.t01	Wine grape	cytosol	30.64	53.35
TraesCS4A01G087700.1	Wheat	cytosol, plastid	58.35	53.09
KRH42244	Soybean	cytosol	43.49	50.43
KRH53173	Soybean	nucleus	51.01	50.09
CDY18020	Canola	cytosol	7.16	50.0
VIT_18s0001g03960.t01	Wine grape	mitochondrion, nucleus	51.74	49.74
KRH64744	Soybean	nucleus	51.56	49.65
VIT_12s0034g00240.t01	Wine grape	nucleus	38.35	49.53
Zm00001d028514_P002	Maize	plastid	58.35	48.7
Zm00001d047875_P003	Maize	plastid	57.43	48.68
KRH58364	Soybean	cytosol, plastid	44.4	48.4
GSMUA_Achr10P...	Banana	cytosol	49.72	47.96
KRH16614	Soybean	mitochondrion	48.26	47.56
KRH16616	Soybean	nucleus	51.01	47.12
Bra000647.1-P	Field mustard	cytosol	46.42	46.77
KRH18819	Soybean	nucleus	50.64	46.46
CDY34000	Canola	cytosol	46.79	46.36
CDY69517	Canola	cytosol	46.42	46.08
HORVU4Hr1G061550.1	Barley	cytosol, plastid	58.17	45.88
Solyc07g053170.2.1	Tomato	cytosol	50.28	45.59
CDY36198	Canola	cytosol	47.71	45.22
Bra037860.1-P	Field mustard	cytosol	47.71	43.41
AT4G08500.1	Thale cress	cytosol, mitochondrion	48.07	43.09
CDX75154	Canola	cytosol	47.34	42.64
Solyc01g104530.2.1	Tomato	nucleus	49.91	40.9
PGSC0003DMT400061014	Potato	mitochondrion	49.72	40.69
KXG20217	Sorghum	cytosol	47.52	39.66
KRH10458	Soybean	cytosol	33.58	38.77
AT4G08470.1	Thale cress	cytosol	37.06	36.07
GSMUA_Achr10P...	Banana	mitochondrion	23.3	34.23
CDY18021	Canola	nucleus	24.77	32.93
AT4G08480.1	Thale cress	cytosol, plastid	45.32	31.95
GSMUA_Achr7P08260_001	Banana	cytosol	22.02	31.25
GSMUA_Achr6P22370_001	Banana	cytosol	7.71	28.57
GSMUA_Achr4P23230_001	Banana	mitochondrion	25.87	26.6
GSMUA_Achr4P13360_001	Banana	mitochondrion	18.17	23.97
GSMUA_Achr6P25760_001	Banana	cytosol	23.49	23.97
GSMUA_Achr9P21940_001	Banana	cytosol, mitochondrion, peroxisome, plastid	16.7	22.92
GSMUA_Achr7P15610_001	Banana	cytosol	17.8	22.2
GSMUA_Achr10P...	Banana	mitochondrion	15.96	21.64
GSMUA_Achr5P28170_001	Banana	mitochondrion, plastid	16.51	21.18
GSMUA_Achr3P18900_001	Banana	mitochondrion	13.58	21.14
GSMUA_Achr9P08460_001	Banana	cytosol, plasma membrane, plastid	20.55	21.05
GSMUA_Achr6P07600_001	Banana	mitochondrion	16.33	20.94
GSMUA_Achr7P00640_001	Banana	plastid	26.61	20.77
GSMUA_Achr11P...	Banana	mitochondrion, plastid	15.96	20.71
GSMUA_Achr6P17050_001	Banana	cytosol, mitochondrion	15.6	20.53
GSMUA_Achr3P28860_001	Banana	mitochondrion	16.88	20.26
GSMUA_Achr2P17150_001	Banana	plastid	27.16	19.89
GSMUA_Achr4P13370_001	Banana	cytosol	17.25	19.87
GSMUA_Achr9P04470_001	Banana	extracellular, nucleus, plastid	18.35	19.65
GSMUA_Achr6P13600_001	Banana	mitochondrion	15.41	19.58
GSMUA_Achr6P17610_001	Banana	nucleus	26.05	18.91
GSMUA_Achr4P25300_001	Banana	cytosol	28.81	17.76
GSMUA_Achr5P19460_001	Banana	nucleus	29.72	17.59
GSMUA_Achr6P07590_001	Banana	mitochondrion	16.15	17.43
GSMUA_Achr9P19130_001	Banana	nucleus	20.18	17.19
GSMUA_Achr2P05360_001	Banana	cytosol, mitochondrion, nucleus	20.18	17.16
GSMUA_Achr8P21200_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	17.25	15.11
GSMUA_Achr6P22360_001	Banana	plasma membrane, vacuole	12.11	14.44
GSMUA_Achr11P...	Banana	cytosol	21.65	8.84
GSMUA_Achr6P22350_001	Banana	plasma membrane	1.65	1.04

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.2	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr11G13500_001
EnsemblPlants:GSMUA_Achr11P13500_001	EnsemblPlants:GSMUA_Achr11T13500_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0RRY0	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF404	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002966D7C	SEG:seg

Description

Mitogen-activated protein kinase kinase kinase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G13500_001]

Coordinates

chr11:+:14207252..14214708

Molecular Weight (calculated)

60978.8 Da

IEP (calculated)

5.420

GRAVY (calculated)

-0.491

Length

545 amino acids

Sequence
(BLAST)

001: MGSRHRQQQG TGSRPRLERC NAVKNIDYEA PAAQASWSAC STASEEPRDL RGTRSLDLWP STCAHQTSFR IDGSIEGEVE ILCHSLGLSG PEDFAISVDD
101: WERRKVRSSF DILPRSRILQ MDTPTHEDPS LASNSVPSRP SLLPCTLPRS RGGDEGIRGV RPPPPPSMSV PAIDKMSSTW DIIKSFAPER GVLEAGRRES
201: VDSVENEDKE GVFEADEVTE EELRELWLGD TAEDFNGISS YSTMNDDDSS STTTEPMFMI SPNGRFKRRI KSWMRGVLLG SGSYGMVYEG ISDEGVFFAV
301: KEVSLLDQGS NAEQCILQLE QEIALLSQFQ HENIVQYYGT DKEDSKLYIF LELITQGSLA SLYHKYHLRD SQVSAYTRQI LNGLNYLHER NVVHRDIKCA
401: NILVHANGSV KLADFGLAKE MTKFNMLKSC KGSVYWMAPE VVNPRRTYGP AADIWSLGCT VLEMLTRQIP YPNLEWTQAL FKIGRGEQPP IPDYLSGDAR
501: DFISKCVRVN PNDRPTASQL LEHSFVRGSL RASSGSNLSL FNNKR

Best Arabidopsis Sequence Match ( AT4G08500.1 )
(BLAST)

001: MDRILARMKK STGRRGGDKN ITPVRRLERR DAARNINYDA ASCSSSSAED LSVSTSSLMT RSLEFPEPTS FRIGGGVGEM DRIYRSLGVS GPDDLAISFD
101: AWEACKKRSS SDVVNRFKSF DLDKVRDQDL SEEGPSGVVV GSDSMNHKVQ GQDLSEAGPS GGIVTELSEI GNLITPVDRL VADGVVENRR VMERTPTIVK
201: SKGYLVPNNV VAVGVGVGGG IKGLRPPVLK PPPAMKRPPI DHRGSSWDFL THFAPSETVK RPSSSSSSSE DGCDEEEGKE EEAEAEEMGA RFIQLGDTAD
301: ETCSFTTNEG DSSSTVSNTS PIYPDGGAII TSWQKGQLLG RGSFGSVYEG ISGDGDFFAV KEVSLLDQGS QAQECIQQLE GEIKLLSQLQ HQNIVRYRGT
401: AKDGSNLYIF LELVTQGSLL KLYQRYQLRD SVVSLYTRQI LDGLKYLHDK GFIHRDIKCA NILVDANGAV KLADFGLAKV SKFNDIKSCK GTPFWMAPEV
501: INRKDSDGYG SPADIWSLGC TVLEMCTGQI PYSDLEPVQA LFRIGRGTLP EVPDTLSLDA RLFILKCLKV NPEERPTAAE LLNHPFVRRP LPSVGSGGSG
601: SASPLLRR

Arabidopsis Description

MEKK1Mitogen-activated protein kinase kinase kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39008]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.