Factsheet for TraesCS2D01G497600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G497400.1	Wheat	nucleus	88.67	89.17
TraesCS2D01G497700.1	Wheat	nucleus	74.31	74.52
TraesCS3D01G337300.1	Wheat	nucleus	48.9	47.2
Zm00001d012507_P001	Maize	nucleus	35.08	36.08
EES01668	Sorghum	nucleus	37.57	36.07
TraesCS1D01G300900.1	Wheat	nucleus	19.06	23.79
TraesCS1D01G300600.1	Wheat	nucleus	18.78	23.69
TraesCS1D01G300400.1	Wheat	nucleus	18.51	23.34
TraesCS3D01G337400.1	Wheat	nucleus	20.44	22.98
TraesCS3D01G337100.1	Wheat	nucleus	16.02	21.72
TraesCS3D01G337000.1	Wheat	nucleus	14.92	21.18
TraesCS3D01G238300.1	Wheat	nucleus	16.85	20.96
TraesCS1D01G300700.1	Wheat	nucleus	16.57	19.8
TraesCS3D01G337500.1	Wheat	nucleus	14.64	19.63
TraesCS4D01G119700.1	Wheat	nucleus	11.88	19.37
TraesCS3D01G337600.1	Wheat	nucleus	14.36	19.19
TraesCS1D01G418600.1	Wheat	nucleus	12.98	19.03
TraesCS1D01G418400.1	Wheat	nucleus	13.26	18.82
TraesCS1D01G418000.1	Wheat	nucleus	12.71	18.7
TraesCS1D01G418500.1	Wheat	nucleus	12.43	18.59
TraesCS4D01G178400.1	Wheat	nucleus	10.5	18.45
TraesCS2D01G168600.1	Wheat	nucleus	14.92	18.43
TraesCS1D01G300500.1	Wheat	plastid	15.47	18.24
TraesCS5D01G190700.1	Wheat	nucleus	16.85	17.89
TraesCS2D01G042700.1	Wheat	nucleus	14.36	17.75
TraesCS5D01G190800.1	Wheat	nucleus	17.13	17.66
TraesCS1D01G300300.1	Wheat	nucleus	14.36	16.94
TraesCS2D01G489700.1	Wheat	nucleus	13.54	16.72
TraesCS7D01G345700.1	Wheat	nucleus	13.54	16.44
TraesCS4D01G172200.1	Wheat	nucleus	13.26	16.05
TraesCS2D01G104600.1	Wheat	nucleus	13.81	14.88
TraesCS2D01G104500.1	Wheat	nucleus	14.36	14.81
TraesCS7D01G110600.1	Wheat	nucleus	14.92	14.67
TraesCS6D01G074200.1	Wheat	nucleus	15.75	14.62
TraesCS2D01G104700.1	Wheat	nucleus	13.54	14.16

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31282	PANTHER:PTHR31282:SF34	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS2D01G497600	EnsemblPlants:TraesCS2D01G497600.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2D:+:593370588..593373299

Molecular Weight (calculated)

38819.9 Da

IEP (calculated)

7.472

GRAVY (calculated)

-0.463

Length

362 amino acids

Sequence
(BLAST)

001: MAFGQEAIEQ LSQELVGGYN INARLLALLR RGPLDRRGQE RAAAMSQELS RVFMVSLFML SSRESNRPVV DRMASPAATI TDGSIDDRAP AKDMRICGGE
101: EVAPHRKGRE NEVTKKEITA SPHSDGYQWR KYGQKNIHKR KFARSYYKCM FSHDLGCRAK KTVQQQDSSS GDRPMFQVTY LHKHRCQQQT VPPGEATRSG
201: HFDPQPQHAE LDDDTMASCL AMVIGGAAPA GPPSSSLPSP PPVGAIPDGG RTPSPLDVST GLDAEISCGS PFAPVKAPAG PSSSSSPSSL PVEAIGSSDP
301: AVYVPAGGGL SPCTDAMAMD DIYFPCGPLF SPVAARPISR PDDVPMAVAR FTDTTSAWPR YS

Best Arabidopsis Sequence Match ( AT4G11070.2 )
(BLAST)

001: MEMMNWERRS LLNELIHGLK AAKQLQAILM LNGSTTQHNP TIELAPDPLA HPGKVPGSPA SITGNPRSEE FFNVRSKEFN LSSKKRKMLP KWTEQVRISP
101: ERGLEGPHDD IFSWRKYGQK DILGAKFPRS YYRCTFRNTQ YCWATKQVQR SDGDPTIFEV TYRGTHTCSQ GIPLPEKRET KPKHTVAVNY QNLRASLTVR
201: TGGLGSEAFS FPVTSPLYTY ESINGGGTFY HHVGSSGPSD FTGLISTNTS TGSSPIFDVN FQFDPTAEIN TGFPTFFHNS I

Arabidopsis Description

WRKY41Probable WRKY transcription factor 41 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Y8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.