Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G301000.1 | Wheat | nucleus | 88.5 | 88.5 |
| TraesCS1B01G310900.1 | Wheat | nucleus | 88.15 | 88.46 |
| TraesCS1D01G300400.1 | Wheat | nucleus | 87.8 | 87.8 |
| HORVU1Hr1G069640.2 | Barley | nucleus | 84.67 | 82.94 |
| TraesCS1D01G300900.1 | Wheat | nucleus | 73.17 | 72.41 |
| EES19695 | Sorghum | nucleus | 46.69 | 57.02 |
| Zm00001d010616_P001 | Maize | nucleus, plastid | 44.95 | 56.58 |
| Os05t0478700-00 | Rice | nucleus | 48.43 | 49.64 |
| TraesCS4D01G178400.1 | Wheat | nucleus | 14.98 | 20.87 |
| TraesCS3D01G337300.1 | Wheat | nucleus | 25.78 | 19.73 |
| TraesCS3D01G337100.1 | Wheat | nucleus | 18.12 | 19.48 |
| TraesCS4D01G119700.1 | Wheat | nucleus | 14.98 | 19.37 |
| TraesCS3D01G337000.1 | Wheat | nucleus | 17.07 | 19.22 |
| TraesCS2D01G497700.1 | Wheat | nucleus | 24.04 | 19.11 |
| TraesCS2D01G497600.1 | Wheat | nucleus | 23.69 | 18.78 |
| TraesCS3D01G238300.1 | Wheat | nucleus | 18.82 | 18.56 |
| TraesCS3D01G337400.1 | Wheat | nucleus | 19.86 | 17.7 |
| TraesCS5D01G190700.1 | Wheat | nucleus | 20.56 | 17.3 |
| TraesCS1D01G300700.1 | Wheat | nucleus | 18.12 | 17.16 |
| TraesCS1D01G418600.1 | Wheat | nucleus | 14.63 | 17.0 |
| TraesCS1D01G418500.1 | Wheat | nucleus | 14.29 | 16.94 |
| TraesCS1D01G418400.1 | Wheat | nucleus | 14.98 | 16.86 |
| TraesCS1D01G418000.1 | Wheat | nucleus | 14.29 | 16.67 |
| TraesCS2D01G168600.1 | Wheat | nucleus | 16.72 | 16.38 |
| TraesCS2D01G042700.1 | Wheat | nucleus | 16.72 | 16.38 |
| TraesCS3D01G337500.1 | Wheat | nucleus | 15.33 | 16.3 |
| TraesCS3D01G337600.1 | Wheat | nucleus | 14.98 | 15.87 |
| TraesCS5D01G190800.1 | Wheat | nucleus | 19.16 | 15.67 |
| TraesCS1D01G300500.1 | Wheat | plastid | 16.72 | 15.64 |
| TraesCS1D01G300300.1 | Wheat | nucleus | 16.38 | 15.31 |
| TraesCS7D01G345700.1 | Wheat | nucleus | 15.68 | 15.1 |
| TraesCS4D01G172200.1 | Wheat | nucleus | 15.68 | 15.05 |
| TraesCS2D01G489700.1 | Wheat | nucleus | 15.33 | 15.02 |
| TraesCS2D01G104600.1 | Wheat | nucleus | 16.72 | 14.29 |
| TraesCS2D01G104500.1 | Wheat | nucleus | 17.07 | 13.96 |
| TraesCS6D01G074200.1 | Wheat | nucleus | 18.47 | 13.59 |
| TraesCS2D01G104700.1 | Wheat | nucleus | 16.03 | 13.29 |
| TraesCS7D01G110600.1 | Wheat | nucleus | 16.72 | 13.04 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31282 | PANTHER:PTHR31282:SF24 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS1D01G300600 | EnsemblPlants:TraesCS1D01G300600.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1D:-:398557888..398560908
Molecular Weight (calculated)
31180.6 Da
IEP (calculated)
8.210
GRAVY (calculated)
-0.576
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMRPKSEMS PPPSDQRTAV IEELRKGAQL AECLRQQLEL IPELGRRNAA LANASNISAA LVSSVSMLQS DREQYSCSSD ARAASYAAGA SGAGGRGGSG
101: ARSGAIARTR KARHRQGIHG EELPFKVTLT ETPENDGFHW RKYGEKKILN AVFPRSYYRC GYSDEHRCPA KKVVQQQNNN DPPVFMVTLM NDHTCSSLFP
201: ANDQPPSSSN SATANSQVLD FTKASLSSAV GVSRLKKEED AGMSVTVPSY TYDELASYSS LPLLSPKEWE MEMEIKSLFS HHSGGGT
101: ARSGAIARTR KARHRQGIHG EELPFKVTLT ETPENDGFHW RKYGEKKILN AVFPRSYYRC GYSDEHRCPA KKVVQQQNNN DPPVFMVTLM NDHTCSSLFP
201: ANDQPPSSSN SATANSQVLD FTKASLSSAV GVSRLKKEED AGMSVTVPSY TYDELASYSS LPLLSPKEWE MEMEIKSLFS HHSGGGT
001: MYSYKKISYQ MEEVMSMIFH GMKLVKSLES SLPEKPPESL LTSLDEIVKT FSDANERLKM LLEIKNSETA LNKTKPVIVS VANQMLMQME PGLMQEYWLR
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
Arabidopsis Description
WRKY55WRKY DNA-binding protein 55 [Source:TAIR;Acc:AT2G40740]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.