Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71829 | Canola | nucleus | 83.8 | 94.44 |
| CDY06968 | Canola | nucleus | 48.24 | 88.39 |
| Bra000202.1-P | Field mustard | nucleus | 79.23 | 75.0 |
| AT2G40740.3 | Thale cress | nucleus | 71.83 | 67.77 |
| Bra014693.1-P | Field mustard | nucleus | 44.37 | 47.73 |
| HORVU6Hr1G013890.3 | Barley | nucleus | 26.06 | 33.48 |
| KRH64215 | Soybean | nucleus | 39.08 | 32.94 |
| KRH53718 | Soybean | nucleus | 37.68 | 32.33 |
| VIT_13s0067g03130.t01 | Wine grape | nucleus | 41.2 | 32.14 |
| Solyc06g048870.1.1 | Tomato | nucleus, vacuole | 27.46 | 32.1 |
| GSMUA_Achr9P04830_001 | Banana | nucleus | 19.01 | 29.67 |
| GSMUA_Achr8P01730_001 | Banana | nucleus | 32.04 | 29.64 |
| PGSC0003DMT400022638 | Potato | nucleus | 35.21 | 28.82 |
| GSMUA_Achr6P32460_001 | Banana | nucleus | 29.93 | 26.07 |
| OQU77713 | Sorghum | nucleus | 33.45 | 25.13 |
| TraesCS6A01G080500.1 | Wheat | nucleus | 34.51 | 25.06 |
| TraesCS6D01G074200.1 | Wheat | nucleus | 34.15 | 24.87 |
| TraesCS6B01G108000.1 | Wheat | nucleus | 33.45 | 24.23 |
| Bra000423.1-P | Field mustard | nucleus | 23.59 | 23.84 |
| TraesCS1B01G243100.1 | Wheat | nucleus | 29.58 | 23.4 |
| Zm00001d037854_P001 | Maize | extracellular | 32.75 | 22.74 |
| Os05t0321900-01 | Rice | nucleus | 34.15 | 22.66 |
| Bra004540.1-P | Field mustard | nucleus | 22.18 | 22.11 |
| Bra014426.1-P | Field mustard | nucleus | 21.48 | 22.02 |
| Bra013732.1-P | Field mustard | nucleus | 24.3 | 21.84 |
| Bra019265.1-P | Field mustard | nucleus | 23.59 | 20.74 |
| Bra007243.1-P | Field mustard | nucleus | 19.72 | 20.29 |
| Bra033158.1-P | Field mustard | nucleus | 22.89 | 19.64 |
| Bra009734.1-P | Field mustard | nucleus | 21.13 | 19.17 |
| Bra014692.1-P | Field mustard | nucleus | 19.01 | 18.95 |
| Bra026467.1-P | Field mustard | nucleus | 20.42 | 18.59 |
| Bra003239.1-P | Field mustard | nucleus | 17.96 | 18.02 |
| Bra016974.1-P | Field mustard | nucleus | 19.37 | 16.67 |
| Bra004586.1-P | Field mustard | nucleus | 19.37 | 16.22 |
| Bra000203.1-P | Field mustard | nucleus | 18.31 | 15.29 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EnsemblPlantsGene:Bra016975 | EnsemblPlants:Bra016975.1 | EnsemblPlants:Bra016975.1-P | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M4DKE6 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF38 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI000254511C | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
AT2G40740 (E=3e-079) WRKY55, ATWRKY55 | WRKY55; transcription factor
Coordinates
chrA04:+:17307286..17308919
Molecular Weight (calculated)
31616.1 Da
IEP (calculated)
6.864
GRAVY (calculated)
-0.658
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMIFQGLKL VKELESSLPE KSLEALSTSL DEITRTFGDA NERLKIVLEF RNSVVVSCSD QLLMQNEPGL MQEYWLRCGG STSSQGTGAV TQRQIMAVED
101: GGRNLTAVER SGGSGSNPST PRQRRRKNEG GEHVVLVAAL RTGNINLPPD DNHTWRKYGQ KEILGSKFPR AYYRCTHQKL YNCPAKKQVQ RLNDDPFTFR
201: VTYRGSHTCQ IYSTAPTASA AAPTTPVTTS FSPDYGPPLF DMADAMMFGS SGIGVNMDIY PFNDPSHHDD HCYRRSENSD DEDK
101: GGRNLTAVER SGGSGSNPST PRQRRRKNEG GEHVVLVAAL RTGNINLPPD DNHTWRKYGQ KEILGSKFPR AYYRCTHQKL YNCPAKKQVQ RLNDDPFTFR
201: VTYRGSHTCQ IYSTAPTASA AAPTTPVTTS FSPDYGPPLF DMADAMMFGS SGIGVNMDIY PFNDPSHHDD HCYRRSENSD DEDK
001: MYSYKKISYQ MEEVMSMIFH GMKLVKSLES SLPEKPPESL LTSLDEIVKT FSDANERLKM LLEIKNSETA LNKTKPVIVS VANQMLMQME PGLMQEYWLR
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
Arabidopsis Description
WRKY55WRKY DNA-binding protein 55 [Source:TAIR;Acc:AT2G40740]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.