Factsheet for VIT_07s0031g00530.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 5
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_05s0020g04420.t01
VIT_06s0009g01910.t01
VIT_08s0040g00470.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50310.1	VIT_06s0009g01910.t01	AT2G41090.1	17360592
AT3G50310.1	VIT_08s0040g00470.t01	AT2G41090.1	17360592
AT3G50310.1	VIT_05s0020g04420.t01	AT4G14640.1	17360592
AT3G50310.1	VIT_06s0009g01910.t01	AT5G21274.1	17360592
AT3G50310.1	VIT_08s0040g00470.t01	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74789	Soybean	nucleus	46.61	52.44
AT4G36950.1	Thale cress	plastid	47.15	51.79
KRH04602	Soybean	nucleus	47.7	51.61
KRH77009	Soybean	nucleus	47.97	51.16
KRH28462	Soybean	plastid	47.97	51.16
KRH57939	Soybean	nucleus	47.15	51.03
KRH66431	Soybean	plastid	47.97	50.86
Bra036070.1-P	Field mustard	cytosol	46.34	50.0
CDY30595	Canola	cytosol	46.34	50.0
AT3G50310.1	Thale cress	cytosol	46.34	50.0
CDY17760	Canola	cytosol	45.8	49.42
CDX83120	Canola	cytosol	45.26	49.26
AT5G67080.1	Thale cress	cytosol	45.8	49.13
Bra030001.1-P	Field mustard	cytosol	44.99	48.97
CDY01441	Canola	cytosol	44.99	47.98
Solyc02g090970.1.1	Tomato	cytosol, nucleus, plasma membrane, plastid	46.61	47.78
CDY12801	Canola	cytosol	44.72	47.69
Bra011739.1-P	Field mustard	plastid	45.53	47.46
CDX75628	Canola	plastid	45.53	47.46
Bra012131.1-P	Field mustard	cytosol	44.44	47.4
KRH28449	Soybean	plastid	33.88	47.17
CDX69280	Canola	plastid	44.99	47.03
PGSC0003DMT400010342	Potato	cytosol, plastid	45.26	46.39
PGSC0003DMT400065492	Potato	nucleus	44.17	45.79
Solyc02g064980.1.1	Tomato	cytosol	44.44	45.68
PGSC0003DMT400010341	Potato	cytosol	43.36	44.94
Solyc02g090980.1.1	Tomato	cytosol	43.09	44.79
PGSC0003DMT400010340	Potato	nucleus	42.55	43.61
Solyc02g090990.1.1	Tomato	cytosol	42.01	43.54
GSMUA_Achr9P21940_001	Banana	cytosol, mitochondrion, peroxisome, plastid	43.36	40.3
VIT_12s0034g02540.t01	Wine grape	cytosol	35.5	39.82
KRH66433	Soybean	cytosol, plastid	35.77	38.15
GSMUA_Achr4P13370_001	Banana	cytosol	46.88	36.58
VIT_10s0116g01230.t01	Wine grape	plastid	33.06	32.53
VIT_12s0142g00700.t01	Wine grape	cytosol	22.76	31.82
VIT_12s0035g01230.t01	Wine grape	nucleus	30.62	31.13
VIT_07s0130g00300.t01	Wine grape	nucleus	32.25	31.07
VIT_12s0059g00870.t01	Wine grape	plastid	34.96	30.71
VIT_12s0035g00210.t01	Wine grape	cytosol	20.33	30.36
VIT_19s0090g00820.t01	Wine grape	plastid	35.23	27.66
VIT_12s0034g00750.t01	Wine grape	cytosol	22.49	26.52
VIT_06s0004g06850.t01	Wine grape	cytosol	33.88	24.95
VIT_12s0034g00240.t01	Wine grape	nucleus	23.85	20.85
VIT_00s1194g00010.t01	Wine grape	plastid	26.83	20.41
VIT_02s0025g03850.t01	Wine grape	plastid	12.74	19.26
VIT_18s0001g11240.t01	Wine grape	cytosol	27.1	19.23
VIT_04s0044g01290.t01	Wine grape	nucleus	27.64	16.37
VIT_18s0001g03960.t01	Wine grape	mitochondrion, nucleus	24.66	16.05
VIT_14s0128g00430.t01	Wine grape	cytosol	28.73	15.82
VIT_10s0116g01240.t01	Wine grape	plastid	33.6	15.6
VIT_00s0567g00010.t01	Wine grape	plastid	29.0	15.13
VIT_05s0020g02910.t01	Wine grape	nucleus	27.91	15.01
VIT_02s0025g03370.t01	Wine grape	cytosol	28.18	11.54
VIT_16s0050g00770.t01	Wine grape	cytosol	27.64	11.44
VIT_01s0011g02270.t01	Wine grape	cytosol	25.2	6.62

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100259363	wikigene:100259363	MapMan:18.4.2.2	ProteinID:CBI21416	ProteinID:CBI21416.3
UniProt:D7SVW7	EMBL:FN595233	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0007049	GO:GO:0007154
GO:GO:0007165	GO:GO:0007346	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0023014	GO:GO:0031098	GO:GO:0032147	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100259363	wikigene:LOC100259363	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF334	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001BE191B	ArrayExpress:VIT_07s0031g00530	EnsemblPlantsGene:VIT_07s0031g00530	EnsemblPlants:VIT_07s0031g00530.t01
unigene:Vvi.17026	RefSeq:XP_002282686	RefSeq:XP_002282686.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr7:-:16722078..16724988

Molecular Weight (calculated)

41002.1 Da

IEP (calculated)

4.867

GRAVY (calculated)

-0.299

Length

369 amino acids

Sequence
(BLAST)

001: MTWVRGGTIG RGSFATVSLA VSRAGEDRFP PLMAVKSCGV EDSATLRNET QVLSRLGDCQ EVLRCYGDEY SCEGGRELYN VLLEYAAGGS LADYVRDFGA
101: LVESDVKRYT RSILRGLDYI HGVGFVHCDV KLQNLLLCSS NDSVFCAKIG DFGLAKKAEK VAEKKGFRGT PMYMAPECLS GEEHSAAADI WALGCAVVEM
201: ASGKPAWQCQ PGTDANALLF RIWGGKASPE TPSELSEEGK DFLEKCFLRD PRKRWTAEML LDHPFVAGTD VTVPLKQSDE ASTSPRSPFD FPEWASDHTP
301: SPTPDSEACF DRDLNSWLNS SSHSWTSPAD RIRQLVTDQT PNWSVSESWF AVRNNFWIRF VIFYFYSCY

Best Arabidopsis Sequence Match ( AT4G36950.1 )
(BLAST)

001: MEWIRRETIG HGSFSTVSLA TTSGSSSKAF PSLMAVKSSG VVCSAALRNE RDVLDDLGDC SEIVRCFGEG RTVENGEEIY NLFLEYASGG SLADRIKSSG
101: EALPEFEVRR FTRSIVKGLC HIHGNGFTHC DIKLENVLVF GDGDVKISDF GLAKRRSGEV CVEIRGTPLY MAPESVNHGE FESPADIWAL GCSVVEMSSG
201: KTAWCLEDGV MNNVMSLLVR IGSGDEVPRI PVELSEEGKD FVSKCFVKNA AERWTAEMLL DHPFLAVDDE SGEEDEACSV SPRNPFDFPG WNSVQSPVND
301: SVMFGSLVGS PEERISGLVS EKVPDWSVSC DWVNVR

Arabidopsis Description

MAPKKK21Mitogen-activated protein kinase kinase kinase 21 [Source:UniProtKB/TrEMBL;Acc:Q6K1M3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.