Factsheet for Solyc02g090990.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g008950.2.1
Solyc03g005240.1.1
Solyc06g053930.2.1
Solyc10g077010.1.1
Solyc10g081170.1.1
Solyc11g072240.1.1
Solyc12g099990.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50310.1	Solyc01g008950.2.1	AT2G41090.1	17360592
AT3G50310.1	Solyc10g077010.1.1	AT2G41090.1	17360592
AT3G50310.1	Solyc10g081170.1.1	AT2G41090.1	17360592
AT3G50310.1	Solyc11g072240.1.1	AT2G41090.1	17360592
AT3G50310.1	Solyc12g099990.1.1	AT2G41090.1	17360592
AT3G50310.1	Solyc03g005240.1.1	AT4G14640.1	17360592
AT3G50310.1	Solyc06g053930.2.1	AT4G14640.1	17360592
AT3G50310.1	Solyc01g008950.2.1	AT5G21274.1	17360592
AT3G50310.1	Solyc10g077010.1.1	AT5G21274.1	17360592
AT3G50310.1	Solyc10g081170.1.1	AT5G21274.1	17360592
AT3G50310.1	Solyc11g072240.1.1	AT5G21274.1	17360592
AT3G50310.1	Solyc12g099990.1.1	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400010340	Potato	nucleus	93.26	92.22
Solyc02g090980.1.1	Tomato	cytosol	78.65	78.87
Solyc02g090970.1.1	Tomato	cytosol, nucleus, plasma membrane, plastid	74.16	73.33
Solyc02g064980.1.1	Tomato	cytosol	66.57	66.02
KRH04602	Soybean	nucleus	48.31	50.44
KRH28449	Soybean	plastid	37.08	49.81
KRH57939	Soybean	nucleus	46.91	48.97
Bra030001.1-P	Field mustard	cytosol	45.22	47.49
CDX83120	Canola	cytosol	45.22	47.49
KRH66431	Soybean	plastid	46.07	47.13
KRH28462	Soybean	plastid	45.51	46.82
AT4G36950.1	Thale cress	plastid	44.1	46.73
CDY17760	Canola	cytosol	44.66	46.49
CDY30595	Canola	cytosol	44.66	46.49
Bra036070.1-P	Field mustard	cytosol	44.66	46.49
KRH74789	Soybean	nucleus	42.7	46.34
KRH77009	Soybean	nucleus	44.94	46.24
AT5G67080.1	Thale cress	cytosol	44.38	45.93
AT3G50310.1	Thale cress	cytosol	44.1	45.91
CDY12801	Canola	cytosol	44.38	45.66
CDY01441	Canola	cytosol	44.38	45.66
Bra012131.1-P	Field mustard	cytosol	44.1	45.38
CDX75628	Canola	plastid	43.82	44.07
Bra011739.1-P	Field mustard	plastid	43.82	44.07
CDX69280	Canola	plastid	42.98	43.34
VIT_07s0031g00530.t01	Wine grape	mitochondrion	43.54	42.01
Solyc12g017710.1.1	Tomato	cytosol	19.94	40.11
Solyc06g065750.1.1	Tomato	mitochondrion	26.69	39.75
KRH66433	Soybean	cytosol, plastid	38.48	39.6
Solyc07g051890.1.1	Tomato	cytosol, mitochondrion, plastid	35.11	37.99
Solyc07g051920.1.1	Tomato	cytosol	34.27	37.89
Solyc07g051870.1.1	Tomato	mitochondrion	34.55	37.39
Solyc07g051860.1.1	Tomato	cytosol	33.43	36.5
Solyc06g065660.1.1	Tomato	cytosol	33.15	36.31
Solyc02g064930.1.1	Tomato	mitochondrion	32.3	36.16
GSMUA_Achr9P21940_001	Banana	cytosol, mitochondrion, peroxisome, plastid	40.17	36.02
Solyc07g051880.1.1	Tomato	plastid	32.87	35.89
Solyc06g066130.1.1	Tomato	mitochondrion	22.47	35.71
Solyc12g017740.1.1	Tomato	plasma membrane	20.51	34.93
Solyc03g117640.1.1	Tomato	nucleus	39.04	34.32
Solyc06g065790.1.1	Tomato	mitochondrion	34.27	34.17
Solyc02g064880.1.1	Tomato	mitochondrion	21.63	34.07
Solyc08g069090.1.1	Tomato	mitochondrion	30.34	33.75
Solyc02g064870.1.1	Tomato	cytosol, mitochondrion, nucleus	28.37	33.55
Solyc12g017760.1.1	Tomato	nucleus, plasma membrane, vacuole	15.17	33.33
Solyc07g051930.1.1	Tomato	cytosol	34.55	33.24
Solyc01g103240.2.1	Tomato	cytosol	32.87	32.59
Solyc06g068510.1.1	Tomato	nucleus	37.64	31.46
GSMUA_Achr4P13370_001	Banana	cytosol	41.57	31.29
Solyc08g069070.1.1	Tomato	mitochondrion	28.37	31.27
Solyc02g064920.1.1	Tomato	mitochondrion	28.93	29.94
Solyc08g076490.2.1	Tomato	cytosol, golgi, nucleus	30.62	28.91
Solyc07g064820.1.1	Tomato	plastid	32.58	23.67
Solyc07g047910.1.1	Tomato	plasma membrane	32.02	23.51
Solyc11g006000.1.1	Tomato	nucleus	28.09	16.29
Solyc01g079750.2.1	Tomato	cytosol	30.62	15.84
Solyc07g053170.2.1	Tomato	cytosol	25.84	15.31
Solyc02g065110.2.1	Tomato	nucleus, plastid	24.72	13.97
Solyc01g104530.2.1	Tomato	nucleus	25.84	13.83
Solyc04g064590.1.1	Tomato	nucleus	12.92	13.77
Solyc02g090430.2.1	Tomato	nucleus, plastid	23.88	13.32
Solyc12g088940.1.1	Tomato	plastid	25.0	13.09
Solyc04g079400.2.1	Tomato	plastid	25.28	12.59
Solyc08g081210.2.1	Tomato	nucleus, plastid	28.65	12.14
Solyc03g025360.2.1	Tomato	cytosol	28.65	11.46
Solyc06g036080.2.1	Tomato	cytosol	28.93	11.28
Solyc01g098980.2.1	Tomato	cytosol	30.9	6.8
Solyc11g033270.1.1	Tomato	cytosol	24.72	6.28

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0007049	GO:GO:0007154
GO:GO:0007165	GO:GO:0007346	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0023014	GO:GO:0031098	GO:GO:0032147	InterPro:IPR000719
UniProt:K4BCP8	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24361	PANTHER:PTHR24361:SF334	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:Solyc02g090990.1	EnsemblPlants:Solyc02g090990.1.1	UniParc:UPI00027677B9	SEG:seg	:	:

Description

No Description!

Coordinates

chr2:+:52440998..52442068

Molecular Weight (calculated)

39566.2 Da

IEP (calculated)

5.179

GRAVY (calculated)

-0.348

Length

356 amino acids

Sequence
(BLAST)

001: MDWVRGEAVG HGSFGKVDFA IPKLHKTHIL PLMVVKSSAA SSSATLINEK MILDELNSCP YIIRCLGDSY TYEKGEKLYN VLLEYASGGA LSEKLNNSGD
101: RRLPEIEIRK YSKALLKGLH YIHKRRYVHC DIKPQNILLG KDGQVKIADF GLAKRAESVK DDKLRSELRG TPLYMSPEMV TGGEQDTPAD IWALGCVISE
201: IATGVPVWGY SDLTQLLMKI GVGDELPEFP TKLSEEGKDF LEKCLVKDPK KRWTAEMLLK HPFVTDEDDT VTLNYSGSPS TSPRCPFDFP DWISDDSVES
301: SVTSQITSLP SPAIQELLNF SGGSLSTSPA ERLRGLMNEL TKSEWSDADD NWVSIR

Best Arabidopsis Sequence Match ( AT4G36950.1 )
(BLAST)

001: MEWIRRETIG HGSFSTVSLA TTSGSSSKAF PSLMAVKSSG VVCSAALRNE RDVLDDLGDC SEIVRCFGEG RTVENGEEIY NLFLEYASGG SLADRIKSSG
101: EALPEFEVRR FTRSIVKGLC HIHGNGFTHC DIKLENVLVF GDGDVKISDF GLAKRRSGEV CVEIRGTPLY MAPESVNHGE FESPADIWAL GCSVVEMSSG
201: KTAWCLEDGV MNNVMSLLVR IGSGDEVPRI PVELSEEGKD FVSKCFVKNA AERWTAEMLL DHPFLAVDDE SGEEDEACSV SPRNPFDFPG WNSVQSPVND
301: SVMFGSLVGS PEERISGLVS EKVPDWSVSC DWVNVR

Arabidopsis Description

MAPKKK21Mitogen-activated protein kinase kinase kinase 21 [Source:UniProtKB/TrEMBL;Acc:Q6K1M3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.