Skip to main content
crop-pal logo
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • nucleus 4
  • plastid 2
  • cytosol 2
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400031805 Potato cytosol 96.43 92.68
VIT_02s0025g03850.t01 Wine grape plastid 22.98 79.1
VIT_02s0025g03370.t01 Wine grape cytosol 66.55 62.04
AT1G63700.1 Thale cress nucleus 60.12 57.19
CDY08319 Canola nucleus 59.17 57.13
CDY45350 Canola nucleus 59.17 57.13
Solyc03g025360.2.1 Tomato cytosol 60.36 56.97
Bra027792.1-P Field mustard nucleus 59.17 56.61
TraesCS6B01G279300.1 Wheat cytosol 51.9 55.47
TraesCS2A01G407600.1 Wheat cytosol 54.17 55.02
KRH77558 Soybean cytosol, plastid 56.9 55.01
GSMUA_Achr4P25300_001 Banana cytosol 57.74 54.86
KRH27916 Soybean cytosol, plastid 55.0 54.74
Solyc06g036080.2.1 Tomato cytosol 59.05 54.33
GSMUA_Achr5P19460_001 Banana nucleus 57.5 52.44
HORVU2Hr1G096350.1 Barley cytosol 55.36 52.31
TraesCS2D01G404700.1 Wheat cytosol 55.36 52.31
Zm00001d017525_P002 Maize cytosol 55.6 52.3
EES05759 Sorghum cytosol 55.48 52.07
TraesCS2B01G425500.2 Wheat nucleus 54.64 51.63
OQU82130 Sorghum cytosol, plastid 54.76 51.34
Zm00001d002688_P001 Maize nucleus, plastid 42.62 51.29
Os04t0559800-01 Rice plasma membrane 54.52 51.23
TraesCS6D01G227300.1 Wheat cytosol 53.1 50.8
TraesCS6A01G245000.3 Wheat cytosol 53.1 50.8
HORVU6Hr1G064150.1 Barley cytosol 53.1 50.8
Os02t0666300-01 Rice plasma membrane 53.33 50.11
Zm00001d051404_P003 Maize nucleus 52.98 49.23
KRH41200 Soybean cytosol 55.71 45.09
Solyc11g006000.1.1 Tomato nucleus 31.67 43.32
Solyc04g064590.1.1 Tomato nucleus 16.19 40.72
Solyc07g051860.1.1 Tomato cytosol 13.69 35.28
Solyc02g065110.2.1 Tomato nucleus, plastid 25.83 34.44
Solyc07g051890.1.1 Tomato cytosol, mitochondrion, plastid 13.45 34.35
Solyc07g051870.1.1 Tomato mitochondrion 13.45 34.35
Solyc07g051920.1.1 Tomato cytosol 13.1 34.16
Solyc07g051880.1.1 Tomato plastid 13.1 33.74
Solyc02g090430.2.1 Tomato nucleus, plastid 25.48 33.54
Solyc04g079400.2.1 Tomato plastid 26.67 31.33
Solyc01g103240.2.1 Tomato cytosol 13.33 31.2
Solyc12g088940.1.1 Tomato plastid 25.24 31.18
Solyc06g065750.1.1 Tomato mitochondrion 8.81 30.96
Solyc07g051930.1.1 Tomato cytosol 13.45 30.54
Solyc08g069090.1.1 Tomato mitochondrion 11.43 30.0
Solyc12g017710.1.1 Tomato cytosol 6.31 29.94
Solyc02g090980.1.1 Tomato cytosol 12.38 29.3
Solyc12g017740.1.1 Tomato plasma membrane 7.26 29.19
Solyc02g090970.1.1 Tomato cytosol, nucleus, plasma membrane, plastid 12.38 28.89
Solyc02g090990.1.1 Tomato cytosol 12.14 28.65
Solyc02g064870.1.1 Tomato cytosol, mitochondrion, nucleus 10.12 28.24
Solyc02g064930.1.1 Tomato mitochondrion 10.6 27.99
Solyc08g069070.1.1 Tomato mitochondrion 10.71 27.86
Solyc02g064980.1.1 Tomato cytosol 11.9 27.86
Solyc06g065660.1.1 Tomato cytosol 10.71 27.69
Solyc06g065790.1.1 Tomato mitochondrion 11.67 27.45
Solyc06g066130.1.1 Tomato mitochondrion 7.26 27.23
Solyc07g053170.2.1 Tomato cytosol 18.57 25.96
Solyc12g017760.1.1 Tomato nucleus, plasma membrane, vacuole 5.0 25.93
Solyc01g104530.2.1 Tomato nucleus 20.36 25.71
Solyc03g117640.1.1 Tomato nucleus 12.02 24.94
Solyc02g064880.1.1 Tomato mitochondrion 6.55 24.34
Solyc01g079750.2.1 Tomato cytosol 19.76 24.13
Solyc06g068510.1.1 Tomato nucleus 12.14 23.94
Solyc08g076490.2.1 Tomato cytosol, golgi, nucleus 10.48 23.34
Solyc02g064920.1.1 Tomato mitochondrion 9.17 22.38
Solyc07g064820.1.1 Tomato plastid 12.98 22.24
Solyc07g047910.1.1 Tomato plasma membrane 10.48 18.14
Solyc01g098980.2.1 Tomato cytosol 19.88 10.32
Solyc11g033270.1.1 Tomato cytosol 16.43 9.85
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.2.2GO:GO:0000003GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006464GO:GO:0006468GO:GO:0006950GO:GO:0007049
GO:GO:0007154GO:GO:0007165GO:GO:0007275GO:GO:0007346GO:GO:0008150GO:GO:0008152
GO:GO:0009653GO:GO:0009791GO:GO:0009987GO:GO:0010098GO:GO:0010103GO:GO:0010229
GO:GO:0016301GO:GO:0016740GO:GO:0019538GO:GO:0023014GO:GO:0031098GO:GO:0032147
InterPro:IPR000719UniProt:K4CPB8InterPro:Kinase-like_dom_sfPFAM:PF00069ScanProsite:PS00107PFscan:PS50011
PANTHER:PTHR24361PANTHER:PTHR24361:SF458InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112
EnsemblPlantsGene:Solyc08g081210.2EnsemblPlants:Solyc08g081210.2.1UniParc:UPI000276BEDFSEG:seg::
Description
Mitogen-activated protein kinase kinase kinase YODA [Source:Projected from Arabidopsis thaliana (AT1G63700) UniProtKB/Swiss-Prot;Acc:Q9CAD5]
Coordinates
chr8:-:64269787..64276377
Molecular Weight (calculated)
90251.5 Da
IEP (calculated)
9.514
GRAVY (calculated)
-0.490
Length
840 amino acids
Sequence
(BLAST)
001: MRSWWGKSSS KDVRRKSTKE SFIDIINRKL KIFTTEKSSG KSGSSRRRRK DTNSVKGSQS RVSRSPSPST GSIILVTGEV SEPSLTLPLP MPRHLPHGPT
101: AAGVDRDLPT ASVSCDSSSD SDDLTDSRFL SPQTSDYENG SRTALNSPSS LKQKVQSPIA SNASSGEMLK SATLLSDNQA IPTSPRQRLL RSHVPPGLQI
201: PHHGASYSAP DSSMSSPSRS PMRVFGHETV MNPGFWLGKP HGEITFLGSG HCSSPGSGQN SGHNSIGGDM LAQPFWPHSR CSPECSPVPS PRMTSPGPGS
301: RIHSGAVTPL HPRAGGTLAE SSTASLDNGK QQSHRLPLPP ISIPHSSTFS LSCSMTPAIP RSPGRTGNPP SPGPRWKKGR LIGSGTFGHV YLGFNSESGE
401: MCAMKEVTLF SDDPKSRESA QQLGQEISLL SRLRHPNIVQ YYGSETVDDK LYIYLEYVSG GSIYKILQEY GQLGELAIQS YTQQILSGLA YLHAKNTVHR
501: DIKGANILVD PNGRVKLADF GMAKHITGHY CPLSFKGSPY WMAPEVIKNS NGCNLAVDIW SLGCTVLEMA TTKPPWSQYE GVAAIFKIGN SKEVPAIPYH
601: LSDKGKDFVR QCLQRNPLHR PTASQLLKHP FVKSTAPMER FIGIGHLKDP PCVGSEEVAV HHEPRSSIFF PGFSDVPVPR SCPVSPVGIE SPVYHSQSPK
701: HMSGRLSPST ISSPRAVSGS STPLSGGGGA VPLSNPIMPT TSSSEDMGTS PKAQSCFYPD AYTSHGLKSD MSREAPPYGN GFFGENFGGH AQSGVNGQPY
801: QGQSVLANRV AQQLLRDQVK LSPSFDLNPG SPVFSWDNGV
Best Arabidopsis Sequence Match ( AT1G63700.2 )
(BLAST)
001: MPWWSKSKDE KKKTNKESII DAFNRKLGFA SEDRSSGRSR KSRRRRDEIV SERGAISRLP SRSPSPSTRV SRCQSFAERS PAVPLPRPIV RPHVTSTDSG
101: MNGSQRPGLD ANLKPSWLPL PKPHGATSIP DNTGAEPDFA TASVSSGSSV GDIPSDSLLS PLASDCENGN RTPVNISSRD QSMHSNKNSA EMFKPVPNKN
201: RILSASPRRR PLGTHVKNLQ IPQRDLVLCS APDSLLSSPS RSPMRSFIPD QVSNHGLLIS KPYSDVSLLG SGQCSSPGSG YNSGNNSIGG DMATQLFWPQ
301: SRCSPECSPV PSPRMTSPGP SSRIQSGAVT PLHPRAGGST TGSPTRRLDD NRQQSHRLPL PPLLISNTCP FSPTYSAATS PSVPRSPARA EATVSPGSRW
401: KKGRLLGMGS FGHVYLGFNS ESGEMCAMKE VTLCSDDPKS RESAQQLGQE ISVLSRLRHQ NIVQYYGSET VDDKLYIYLE YVSGGSIYKL LQEYGQFGEN
501: AIRNYTQQIL SGLAYLHAKN TVHRDIKGAN ILVDPHGRVK VADFGMAKHI TAQSGPLSFK GSPYWMAPEV IKNSNGSNLA VDIWSLGCTV LEMATTKPPW
601: SQYEGVPAMF KIGNSKELPD IPDHLSEEGK DFVRKCLQRN PANRPTAAQL LDHAFVRNVM PMERPIVSGE PAEAMNVASS TMRSLDIGHA RSLPCLDSED
701: ATNYQQKGLK HGSGFSISQS PRNMSCPISP VGSPIFHSHS PHISGRRSPS PISSPHALSG SSTPLTGCGG AIPFHHQRQT TVNFLHEGIG SSRSPGSGGN
801: FYTNSFFQEP SRQQDRSRSS PRTPPHVFWD NNGSIQPGYN WNKDNQPVLS DHVSQQLLSE HLKLKSLDLR PGFSTPGSTN RGP
Arabidopsis Description
YDAYDA [Source:UniProtKB/TrEMBL;Acc:A0A178WLG6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.