CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35566	Soybean	nucleus	94.42	94.87
TraesCS3A01G016500.1	Wheat	cytosol	15.63	70.5
TraesCS7D01G398000.1	Wheat	cytosol	15.63	70.5
TraesCS6B01G232400.1	Wheat	cytosol	15.95	67.11
KRH68552	Soybean	cytosol	57.42	54.38
TraesCS5B01G476300.1	Wheat	mitochondrion	16.11	54.3
KRG96833	Soybean	cytosol	56.94	54.26
AT1G54960.1	Thale cress	nucleus	51.99	50.08
GSMUA_Achr9P19130_001	Banana	nucleus	50.88	49.84
CDX95018	Canola	cytosol	50.56	48.77
CDX93524	Canola	nucleus	50.56	48.77
AT1G09000.1	Thale cress	cytosol	50.88	47.9
EER98846	Sorghum	nucleus	50.72	46.83
TraesCS5B01G199400.1	Wheat	cytosol	50.56	46.62
Bra018588.1-P	Field mustard	nucleus	48.01	46.59
Zm00001d005696_P001	Maize	cytosol	50.08	46.59
TraesCS5D01G206500.1	Wheat	cytosol	50.56	46.48
TraesCS5A01G200800.1	Wheat	cytosol	50.56	46.48
Zm00001d020355_P002	Maize	cytosol	49.92	45.43
HORVU5Hr1G059840.4	Barley	cytosol	43.86	44.64
Os08t0421800-01	Rice	cytosol	48.17	43.77
KXG25169	Sorghum	nucleus	48.48	43.74
Zm00001d050329_P003	Maize	nucleus	47.37	41.42
KRH26278	Soybean	cytosol	18.18	34.65
KRH28449	Soybean	plastid	14.51	34.34
KRH06039	Soybean	cytosol	17.86	33.33
KRH66431	Soybean	plastid	17.38	31.32
KRH28462	Soybean	plastid	17.22	31.21
KRH74789	Soybean	nucleus	16.11	30.79
KRH00952	Soybean	cytosol	14.04	30.34
KRH77009	Soybean	nucleus	16.43	29.77
KRH10459	Soybean	cytosol	20.57	29.32
KRH25356	Soybean	cytosol	16.27	28.98
KRH04602	Soybean	nucleus	15.47	28.45
KRH55299	Soybean	mitochondrion	11.0	27.94
KRH57939	Soybean	nucleus	15.15	27.86
KRH66433	Soybean	cytosol, plastid	15.15	27.46
KRH56159	Soybean	cytosol, mitochondrion, plastid	16.75	27.27
KRH55302	Soybean	plasma membrane, plastid	12.76	27.12
KRH55037	Soybean	plasma membrane	12.92	27.0
KRH42244	Soybean	cytosol	19.14	25.53
KRH22583	Soybean	plastid	16.11	25.38
KRH43554	Soybean	nucleus	24.08	25.34
KRH59572	Soybean	nucleus	24.24	25.33
KRH58364	Soybean	cytosol, plastid	19.94	25.0
KRH64042	Soybean	nucleus	23.76	24.79
KRG98260	Soybean	mitochondrion	15.15	24.55
KRH26765	Soybean	mitochondrion	15.47	24.49
KRH53896	Soybean	nucleus	23.76	24.19
KRH10458	Soybean	cytosol	18.02	23.94
KRH36483	Soybean	cytosol, mitochondrion, plasma membrane, plastid	15.79	23.46
KRH30249	Soybean	mitochondrion	15.31	23.36
KRH53173	Soybean	nucleus	20.57	23.24
KRH64744	Soybean	nucleus	20.89	23.14
KRH57740	Soybean	plastid	22.33	22.08
KRH16614	Soybean	mitochondrion	19.3	21.88
KRH04666	Soybean	plastid	22.01	21.66
KRH05734	Soybean	cytosol, plastid	19.62	21.65
KRH28506	Soybean	plastid	21.37	21.51
KRH16616	Soybean	nucleus	19.94	21.19
KRH76953	Soybean	plastid	21.21	21.01
KRH72707	Soybean	mitochondrion	15.31	20.6
KRH18819	Soybean	nucleus	19.46	20.54
KRH61238	Soybean	cytosol, plastid	21.05	20.15
KRH17058	Soybean	cytosol, golgi, mitochondrion, nucleus, plastid	15.31	19.71
KRH51939	Soybean	mitochondrion, plastid	20.89	19.52
KRH15298	Soybean	cytosol	20.57	18.38
KRH35266	Soybean	nucleus	25.84	18.26
KRH08892	Soybean	cytosol	26.0	18.15
KRG91565	Soybean	cytosol	25.68	18.13
KRH38416	Soybean	cytosol, plastid	25.84	18.06
KRH27916	Soybean	cytosol, plastid	23.76	17.65
KRH77558	Soybean	cytosol, plastid	24.4	17.61
KRH41200	Soybean	cytosol	25.04	15.13
KRH24194	Soybean	cytosol	29.51	13.41
KRH29165	Soybean	cytosol	29.67	13.36

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100795863	MapMan:13.4.4.1.2	MapMan:18.4.2.2	EMBL:ACUP02012669	ncoils:Coil
EnsemblPlantsGene:GLYMA_20G142900	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0007049	GO:GO:0007154	GO:GO:0007165
GO:GO:0007346	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0023014	GO:GO:0031098	GO:GO:0032147	UniProt:I1NGB3	InterPro:IPR000719
EnsemblPlants:KRG91247	ProteinID:KRG91247	ProteinID:KRG91247.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF628	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002966435	SEG:seg	:

Description

hypothetical protein

Coordinates

chr20:+:38125946..38134607

Molecular Weight (calculated)

69748.0 Da

IEP (calculated)

7.042

GRAVY (calculated)

-0.450

Length

627 amino acids

Sequence
(BLAST)

001: MQDFLGSLRR SLVFRPGGDD SPFAGIANKL GSAIRKSRIA LEPPPPIRWR KGELIGSGGF GHVYMGMNLD SGELIAIKQV LIAPGSVFKE NTQANIRELE
101: EEIKLLKNLK HPNIVRYLGT AREEDSLNIL LEFVPGGSIS SLLGKFGSFP ESVIKMYTKQ LLLGLEYLHD NGIIHRDIKG ANILVDNKGC IKLTDFGASK
201: KVVELATING AKSMKGTPHW MSPEVILQTG HTISTDIWSV ACTVIEMATG KPPWSQQYPQ EVSALFYIGT TKSHPPIPEH LSAEAKDFLL KCFHKEPNLR
301: PSASELLQHP FITCNYHGSY SILRSSIRDS CNKMATYGMN SRNFLDSVQG STCTGLKDVC QIDSIQFSTV YHKADSYQRA SNNDDDMCEM DEDDFFIDSS
401: VKSKSLLASD DMKSFNPMCK PLDDRPCNFD ETQYLEKNRP NLPFSSEALG TEDDDEVTES KIRDFLDAKA LELKKLQTPL YEEFRSISNA AIAPAPIKVA
501: KSKVMSDVSN VTSSIGRSAS QAWRRFSMVG SANVASPGGS HTKYRSKLSG AHCRPLQEIQ PSDLNQSKET LHNAELESSS VSSSFSERQR KWKEELVEEL
601: EWKREMMRQA GIGGKITSPK DRKFYGD

Best Arabidopsis Sequence Match ( AT3G06030.1 )
(BLAST)

001: MQDILGSVRR SLVFRSSLAG DDGTSGGGLS GFVGKINSSI RSSRIGLFSK PPPGLPAPRK EEAPSIRWRK GELIGCGAFG RVYMGMNLDS GELLAIKQVL
101: IAPSSASKEK TQGHIRELEE EVQLLKNLSH PNIVRYLGTV RESDSLNILM EFVPGGSISS LLEKFGSFPE PVIIMYTKQL LLGLEYLHNN GIMHRDIKGA
201: NILVDNKGCI RLADFGASKK VVELATVNGA KSMKGTPYWM APEVILQTGH SFSADIWSVG CTVIEMATGK PPWSEQYQQF AAVLHIGRTK AHPPIPEDLS
301: PEAKDFLMKC LHKEPSLRLS ATELLQHPFV TGKRQEPYPA YRNSLTECGN PITTQGMNVR SSINSLIRRS TCSGLKDVCE LGSLRSSIIY PQKSNNSGFG
401: WRDGDSDDLC QTDMDDLCNI ESVRNNVLSQ STDLNKSFNP MCDSTDNWSC KFDESPKVMK SKSNLLSYQA SQLQTGVPCD EETSLTFAGG SSVAEDDYKG
501: TELKIKSFLD EKAQDLKRLQ TPLLEEFHNA MNPGIPQGAL GDTNIYNLPN LPSISKTPKR LPSRRLSAIS DAMPSPLKSS KRTLNTSRVM QSGTEPTQVN
601: ESTKKGVNNS RCFSEIRRKW EEELYEELER HRENLRHAGA GGKTPLSGHK G

Arabidopsis Description

ANP3Mitogen-activated protein kinase kinase kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:O22042]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.