Factsheet for TraesCS4D01G101800.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G104900.1	Wheat	cytosol, mitochondrion, nucleus	98.49	98.49
TraesCS4A01G211600.1	Wheat	cytosol	97.74	97.89
HORVU4Hr1G017100.3	Barley	cytosol, mitochondrion, nucleus	95.78	95.63
Os11t0207200-01	Rice	cytosol, plasma membrane	67.57	80.87
KXG28265	Sorghum	mitochondrion	77.68	77.1
Zm00001d049080_P001	Maize	mitochondrion	77.38	75.78
GSMUA_Achr6P25760_001	Banana	cytosol	47.96	59.55
KRH59572	Soybean	nucleus	48.11	53.17
KRH43554	Soybean	nucleus	47.66	53.02
KRH64042	Soybean	nucleus	47.96	52.91
VIT_04s0044g01290.t01	Wine grape	nucleus	49.32	52.49
GSMUA_Achr9P08460_001	Banana	cytosol, plasma membrane, plastid	41.78	52.07
KRH53896	Soybean	nucleus	47.81	51.46
PGSC0003DMT400073788	Potato	nucleus	46.46	50.16
Solyc11g006000.1.1	Tomato	nucleus	46.46	50.16
GSMUA_Achr6P17610_001	Banana	nucleus	56.56	49.93
CDX89612	Canola	nucleus	43.44	49.74
AT1G53570.1	Thale cress	cytosol	45.55	49.59
Bra013139.1-P	Field mustard	nucleus	44.04	49.32
CDX93120	Canola	nucleus	44.04	49.24
PGSC0003DMT400063858	Potato	cytosol	30.47	48.67
TraesCS7D01G398000.1	Wheat	cytosol	9.65	46.04
Solyc04g064590.1.1	Tomato	nucleus	21.27	42.22
TraesCS2D01G305500.1	Wheat	mitochondrion	43.74	42.09
TraesCS1D01G118900.1	Wheat	plastid	15.84	30.09
TraesCS6D01G227300.1	Wheat	cytosol	39.52	29.84
TraesCS2D01G404700.1	Wheat	cytosol	38.91	29.02
TraesCS6D01G307100.1	Wheat	cytosol	20.06	25.43
TraesCS3D01G256500.1	Wheat	plastid	16.44	25.41
TraesCS2D01G259300.3	Wheat	mitochondrion	28.21	25.27
TraesCS4D01G217000.1	Wheat	plastid	21.87	24.49
TraesCS1D01G372800.1	Wheat	cytosol	13.57	23.87
TraesCS1D01G372500.1	Wheat	mitochondrion	16.29	23.53
TraesCS3D01G256600.1	Wheat	mitochondrion, plastid	16.14	23.36
TraesCS1D01G372700.1	Wheat	mitochondrion	16.29	23.33
TraesCS5D01G206500.1	Wheat	cytosol	23.98	23.31
TraesCS4D01G038900.1	Wheat	plastid	22.47	23.21
TraesCS3D01G256400.1	Wheat	mitochondrion	15.99	22.75
TraesCS1D01G372900.1	Wheat	mitochondrion	16.29	22.74
TraesCS1D01G372400.1	Wheat	mitochondrion, plastid, vacuole	15.84	22.39
TraesCS1D01G372600.1	Wheat	cytosol	15.54	21.5
TraesCS4D01G194700.1	Wheat	mitochondrion	14.63	20.17
TraesCS2D01G498100.1	Wheat	cytosol	20.51	10.56

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF427	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	EnsemblPlantsGene:TraesCS4D01G101800	EnsemblPlants:TraesCS4D01G101800.3	TIGR:cd06632
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4D:+:80141040..80145084

Molecular Weight (calculated)

71771.7 Da

IEP (calculated)

9.751

GRAVY (calculated)

-0.507

Length

663 amino acids

Sequence
(BLAST)

001: MPAWWKGKGR SKSKAAAPAG DAGTIPAGRD GEKDRKNKKA SSFDEALIGR EGRGKQLQQP APAVGHPLPR PASMPSASAP ASASASASSG GSSSLGSSAA
101: SDEPLDLGIY RISDANRTPA IDSRKQSLVL EEGRFVVNNL ASENNRSCEP SVSPRKEFQP NILDLPSDRT TYCHGRKSTE IVFATRMPNS PPSSRGKHCP
201: TSPVHSRAFG QCPGSPTAWQ DDARNSSSPH PLPLPPGSPC TSSRSLHSQW KKGKLLGSGT FGQVYLGFNS EGGQMCAIKE VKVIADDSNS KECLRQLNQE
301: MLLLNQLSHP NIVQYYGSEL SSETLSVYLE FVSGGSIHKL LQEYGPFGET ILRNYTAQIL SGLAYLHGRN TVHRDIKGAN ILVDPNGDIK LADFGMAKHI
401: SAYTSIKSFK GSPYWMAPEV IMNTNGYSLS VDIWSLGCTI LEMATARPPW SQYEGVAAIF KIGNSKDIPD IPDHLSSEAK SFLKLCLQRD PAARPTAAQL
501: IEHPWVKDQA SVRSSRSGSG ITRDMFSTST DGSKATVKTS IELSSYRSLS PLRDTNLRMR NLVVPASSIP SISTHRASAI SASNVRMNMS LPVSPCTSPL
601: RQYRQSNRSC LPSPPHPAYS AGAANYSPIN NVLYPTRPSN YLTDPWLETP RQKTQTFDSP RRL

Best Arabidopsis Sequence Match ( AT1G53570.1 )
(BLAST)

001: MPTWWGRKSC KNKDDNHRGI ISTDRDIKSS AVVVDPPLTP TRGGTPRCSR EFAGASSAFS GFDSDSTEKK GHPLPRPLLS PVSIHHQDHV SGSTSGSTSV
101: SSVSSSGSAD DQSQLVASRG RGDVKFNVAA APRSPERVSP KAATITTRPT SPRHQRLSGV VSLESSTGRN DDGRSSSECH PLPRPPTSPT SPSAVHGSRI
201: GGGYETSPSG FSTWKKGKFL GSGTFGQVYL GFNSEKGKMC AIKEVKVISD DQTSKECLKQ LNQEINLLNQ LCHPNIVQYY GSELSEETLS VYLEYVSGGS
301: IHKLLKDYGS FTEPVIQNYT RQILAGLAYL HGRNTVHRDI KGANILVDPN GEIKLADFGM AKHVTAFSTM LSFKGSPYWM APEVVMSQNG YTHAVDIWSL
401: GCTILEMATS KPPWSQFEGV AAIFKIGNSK DTPEIPDHLS NDAKNFIRLC LQRNPTVRPT ASQLLEHPFL RNTTRVASTS LPKDFPPRSY DGNFSLQPTR
501: EPYPGRLSHD NYAKQPLSRT IKSPSRENVR AITSLPVSPC SSPLRQLGPA YKSCFLSPPH PSYAFPGQDS GYNLAEFAAS PFRMKKDAMM EPSSFRTQTP
601: NSPLRSRLV

Arabidopsis Description

MAPKKK3Mitogen-activated protein kinase kinase kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:F4HRJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.