Factsheet for TraesCS3D01G256600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

mitochondrion 4
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G289500.1	Wheat	plastid	94.76	91.75
TraesCS3A01G256300.1	Wheat	mitochondrion	89.3	85.03
Os01t0699100-01	Rice	mitochondrion	65.72	70.0
EES01324	Sorghum	plastid	63.32	62.37
Zm00001d043742_P001	Maize	mitochondrion	55.9	60.52
TraesCS1D01G118900.1	Wheat	plastid	46.07	60.46
TraesCS3D01G256500.1	Wheat	plastid	54.59	58.28
Zm00001d011654_P001	Maize	mitochondrion	57.86	58.11
TraesCS1D01G372500.1	Wheat	mitochondrion	53.49	53.38
TraesCS1D01G372700.1	Wheat	mitochondrion	53.93	53.35
TraesCS1D01G372800.1	Wheat	cytosol	43.67	53.05
TraesCS1D01G372400.1	Wheat	mitochondrion, plastid, vacuole	52.4	51.17
TraesCS1D01G372900.1	Wheat	mitochondrion	53.06	51.16
TraesCS1D01G372600.1	Wheat	cytosol	52.84	50.52
TraesCS3D01G256400.1	Wheat	mitochondrion	50.87	50.0
PGSC0003DMT400083928	Potato	cytosol	20.52	46.77
HORVU6Hr1G002500.1	Barley	plastid	39.96	44.74
Solyc07g051870.1.1	Tomato	mitochondrion	30.57	42.55
Solyc07g051890.1.1	Tomato	cytosol, mitochondrion, plastid	30.35	42.25
CDY53387	Canola	cytosol, plasma membrane, plastid	31.0	42.14
Bra015388.1-P	Field mustard	cytosol, plasma membrane, plastid	30.79	41.84
CDY18290	Canola	nucleus, plasma membrane, plastid	30.57	41.54
Solyc07g051860.1.1	Tomato	cytosol	29.48	41.41
Solyc07g051920.1.1	Tomato	cytosol	29.04	41.3
AT1G05100.1	Thale cress	mitochondrion	30.35	41.0
CDY52049	Canola	mitochondrion	31.66	40.85
VIT_10s0116g01230.t01	Wine grape	plastid	33.41	40.8
PGSC0003DMT400038860	Potato	cytosol	29.69	40.72
GSMUA_Achr10P...	Banana	mitochondrion	35.59	40.55
PGSC0003DMT400038863	Potato	cytosol, mitochondrion, plastid	29.48	40.42
Bra021794.1-P	Field mustard	mitochondrion	31.44	40.34
CDY19144	Canola	mitochondrion	31.44	40.34
Solyc07g051880.1.1	Tomato	plastid	28.6	40.18
PGSC0003DMT400038864	Potato	extracellular	29.48	40.18
PGSC0003DMT400090976	Potato	mitochondrion	29.48	40.06
CDY12200	Canola	mitochondrion	31.66	39.73
Bra005599.1-P	Field mustard	mitochondrion	31.44	39.24
KRH25356	Soybean	cytosol	30.13	39.2
VIT_12s0059g00870.t01	Wine grape	plastid	35.81	39.05
KRH26765	Soybean	mitochondrion	33.62	38.89
AT2G32510.1	Thale cress	mitochondrion	31.44	38.71
GSMUA_Achr3P18900_001	Banana	mitochondrion	29.48	38.57
KRH22583	Soybean	plastid	33.41	38.44
CDY42094	Canola	cytosol	31.44	38.3
GSMUA_Achr6P17050_001	Banana	cytosol, mitochondrion	34.06	37.68
GSMUA_Achr11P...	Banana	mitochondrion, plastid	34.28	37.38
Solyc07g051930.1.1	Tomato	cytosol	29.91	37.03
PGSC0003DMT400038861	Potato	plastid	30.57	36.94
KRH56159	Soybean	cytosol, mitochondrion, plastid	31.0	36.88
GSMUA_Achr6P13600_001	Banana	mitochondrion	34.5	36.83
GSMUA_Achr6P07600_001	Banana	mitochondrion	34.06	36.71
CDX97370	Canola	plastid	30.13	34.24
CDY17301	Canola	cytosol	32.1	34.11
Bra028991.1-P	Field mustard	cytosol	33.19	33.7
Bra002933.1-P	Field mustard	cytosol	32.31	33.56
VIT_19s0090g00820.t01	Wine grape	plastid	34.28	33.4
Bra035552.1-P	Field mustard	cytosol	31.22	33.18
CDY20789	Canola	cytosol	32.75	33.11
AT4G26890.1	Thale cress	cytosol	32.1	33.11
CDY36728	Canola	cytosol	32.97	32.97
CDY19916	Canola	cytosol	32.1	32.96
KRH36483	Soybean	cytosol, mitochondrion, plasma membrane, plastid	29.48	31.99
CDY69540	Canola	cytosol	31.44	31.93
CDX89295	Canola	plastid	31.66	31.66
Bra026395.1-P	Field mustard	plastid	31.66	31.66
CDY29258	Canola	cytosol	25.33	31.35
PGSC0003DMT400057171	Potato	plastid	31.22	31.15
GSMUA_Achr6P07590_001	Banana	mitochondrion	33.84	30.69
CDY06612	Canola	cytosol	32.1	30.5
Bra010423.1-P	Field mustard	mitochondrion, plastid	31.0	30.08
CDY14295	Canola	plastid	30.79	29.94
TraesCS4D01G194700.1	Wheat	mitochondrion	31.0	29.52
Solyc07g064820.1.1	Tomato	plastid	31.22	29.18
AT5G55090.2	Thale cress	cytosol, plasma membrane, plastid, vacuole	31.88	28.63
TraesCS7D01G398000.1	Wheat	cytosol	7.42	24.46
VIT_10s0116g01240.t01	Wine grape	plastid	34.28	19.75
TraesCS6D01G307100.1	Wheat	cytosol	21.4	18.74
TraesCS4D01G101800.3	Wheat	cytosol, mitochondrion, nucleus	23.36	16.14
TraesCS4D01G217000.1	Wheat	plastid	20.52	15.88
TraesCS5D01G206500.1	Wheat	cytosol	21.83	14.66
TraesCS2D01G305500.1	Wheat	mitochondrion	21.83	14.51
TraesCS4D01G038900.1	Wheat	plastid	19.87	14.17
TraesCS2D01G259300.3	Wheat	mitochondrion	21.62	13.38
TraesCS2D01G404700.1	Wheat	cytosol	24.67	12.71
TraesCS6D01G227300.1	Wheat	cytosol	24.02	12.53
TraesCS2D01G498100.1	Wheat	cytosol	22.49	8.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361
PANTHER:PTHR24361:SF391	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS3D01G256600	EnsemblPlants:TraesCS3D01G256600.1	TIGR:cd06606	SEG:seg	:	:

Description

No Description!

Coordinates

chr3D:-:358563600..358564976

Molecular Weight (calculated)

48408.8 Da

IEP (calculated)

4.572

GRAVY (calculated)

-0.109

Length

458 amino acids

Sequence
(BLAST)

001: MAIAVSGHWT RLRTLGCGAS GAVVSLAADA ASGELFAVKS VRAADAAQLS REQGILSALC SPHVVGCIGG GGDRDGSYHL FLEFAPGGSL ADEAARNGGR
101: LEERAIRAYA ADVLRGLAYI HGKSLVHGDV KSRNVVIGAD GRAKIADFGC ARALGAAGPI GGTPAFMAPE VARGEEQGPA ADVWALGCTV VEMATGRAPW
201: GKMDNVLAAV HRIGYTDAVP EVPAWLSAEA KSFLAMCFAR NARDRCTAAQ LLEHPFVALQ AGEAKARWVS PKSTLDAAFW ESETEEEEEE EEVSESPCER
301: IKSLACSVLP DWDSDEGWMD VLGEQCEACD SPATKGPADV SSRAPSKVLG SPAVPAEDVA VVGTLSSDEH ELDAEDEPFG DDIILAADPL VDRQIEVRPS
401: SDRDVLLSSS HVPCNNRIVA IEKFRFPQIL LCRSDRLRTE FLPVRGEHSA SPSLHSNS

Best Arabidopsis Sequence Match ( AT4G26890.1 )
(BLAST)

001: MEINWTRGPI IGRGSTATVS IAISSSGELF AVKSADLSSS SLLQKEQSIL STLSSPHMVK YIGTGLTRES NGLVYNILME YVSGGNLHDL IKNSGGKLPE
101: PEIRSYTRQI LNGLVYLHER GIVHCDLKSH NVLVEENGVL KIADMGCAKS VDKSEFSGTP AFMAPEVARG EEQRFPADVW ALGCTMIEMM TGSSPWPELN
201: DVVAAMYKIG FSGESPAIPA WISDKAKDFL KNCLKEDQKQ RWTVEELLKH PFLDDDEESQ TSDCLKNKTS SPSTVLDQRF WDSCESSKSH LVSIDHEDPF
301: AEYSESLDSP ADRIEKLAGD EFSSLLDWDT EDDGGWIQVR GEKHKETEKR DGDEDVICVE ATSSSQTIEE VEDWISNQDS LFSEYSSDDI INNFYSNVAI
401: QGNLIAFHYC TDEDENVSIK NMFRTNNKHL FFKLQAHVKF TNQV

Arabidopsis Description

MAPKKK16Mitogen-activated protein kinase kinase kinase 16 [Source:UniProtKB/TrEMBL;Acc:F4JVS7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.