Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0820400-01 | Rice | nucleus | 37.36 | 45.14 |
| Os03t0820300-01 | Rice | nucleus | 32.76 | 33.53 |
| Os01t0839100-01 | Rice | nucleus | 31.61 | 32.16 |
| PGSC0003DMT400060523 | Potato | mitochondrion | 22.99 | 28.99 |
| Os11t0702400-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 28.16 | 28.82 |
| TraesCS1B01G295400.1 | Wheat | nucleus | 38.51 | 28.27 |
| VIT_06s0004g04180.t01 | Wine grape | nucleus | 25.29 | 27.67 |
| Os11t0702300-00 | Rice | nucleus | 25.29 | 26.99 |
| Solyc05g054650.1.1 | Tomato | plastid | 23.56 | 26.97 |
| TraesCS1A01G285900.1 | Wheat | nucleus | 36.78 | 26.56 |
| Solyc05g054660.1.1 | Tomato | nucleus, plastid | 24.14 | 25.15 |
| KRG90559 | Soybean | nucleus | 23.56 | 23.7 |
| KRH01600 | Soybean | cytosol, extracellular, nucleus | 23.56 | 23.43 |
| VIT_13s0019g00480.t01 | Wine grape | nucleus | 23.56 | 23.3 |
| KRH36195 | Soybean | extracellular | 24.71 | 23.24 |
| Os05t0461200-00 | Rice | cytosol | 27.01 | 22.82 |
| KRH70509 | Soybean | nucleus | 23.56 | 22.78 |
| Os05t0114400-01 | Rice | nucleus | 25.29 | 22.22 |
| Os01t0838600-00 | Rice | nucleus | 27.59 | 22.12 |
| Os03t0279700-01 | Rice | nucleus | 24.14 | 21.99 |
| PGSC0003DMT400060463 | Potato | nucleus | 22.41 | 18.75 |
| Os04t0162500-01 | Rice | vacuole | 27.59 | 16.61 |
| Os02t0823900-00 | Rice | cytosol, nucleus, peroxisome | 25.86 | 13.08 |
Protein Annotations
| EnsemblPlants:Os05t0460900-00 | EnsemblPlantsGene:Os05g0460900 | EntrezGene:107278211 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF206 |
| PFAM:PF13912 | PFscan:PS50157 | ProteinID:BAS94409.1 | RefSeq:XP_015638878.1 | ScanProsite:PS00028 | SEG:seg |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0001C7CC89 | UniProt:A0A0N7KKX2 | MapMan:15.5.15 | : |
Description
Hypothetical conserved gene. (Os05t0460900-00)
Coordinates
chr5:-:22638486..22639041
Molecular Weight (calculated)
18044.2 Da
IEP (calculated)
8.038
GRAVY (calculated)
-0.415
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGQRAVGE GSGGLRPTTH VAGGGGSARG EYFRCKTCSK TFTSFQALGG HRTGHTRMAA RQRQEHGAAG AAVVGATNNQ RRVVSAHQWH LCAVCGVEFR
101: MGQALGGHMR RHRGEAAAAT PPPAAAAASA GAVSSMEPPE MIDLNSPPAV EEAGEGDQEV ERAEQEPHLL NLLV
101: MGQALGGHMR RHRGEAAAAT PPPAAAAASA GAVSSMEPPE MIDLNSPPAV EEAGEGDQEV ERAEQEPHLL NLLV
001: MVARSEEVEI VEDTAAKCLM LLSRVGECGG GGEKRVFRCK TCLKEFSSFQ ALGGHRASHK KLINSSDPSL LGSLSNKKTK TATSHPCPIC GVEFPMGQAL
101: GGHMRRHRSE KASPGTLVTR SFLPETTTVT TLKKSSSGKR VACLDLDSME SLVNWKLELG RTIS
101: GGHMRRHRSE KASPGTLVTR SFLPETTTVT TLKKSSSGKR VACLDLDSME SLVNWKLELG RTIS
Arabidopsis Description
ZAT8Zinc finger protein ZAT8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX85]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.