Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d038379_P001 | Maize | nucleus | 42.72 | 47.31 |
| EES18355 | Sorghum | nucleus | 46.6 | 45.93 |
| GSMUA_Achr11P... | Banana | nucleus | 31.55 | 43.05 |
| TraesCS1A01G286100.1 | Wheat | nucleus | 37.38 | 42.78 |
| PGSC0003DMT400060523 | Potato | mitochondrion | 28.64 | 42.75 |
| GSMUA_Achr6P33180_001 | Banana | nucleus | 27.67 | 42.54 |
| VIT_06s0004g04180.t01 | Wine grape | nucleus | 32.52 | 42.14 |
| Solyc05g054650.1.1 | Tomato | plastid | 31.07 | 42.11 |
| VIT_13s0019g00480.t01 | Wine grape | nucleus | 33.98 | 39.77 |
| KRH01600 | Soybean | cytosol, extracellular, nucleus | 33.5 | 39.43 |
| GSMUA_Achr5P28550_001 | Banana | nucleus | 32.52 | 39.18 |
| KRH70509 | Soybean | nucleus | 33.5 | 38.33 |
| KRG90559 | Soybean | nucleus | 32.04 | 38.15 |
| Os01t0838600-00 | Rice | nucleus | 39.81 | 37.79 |
| Solyc05g054660.1.1 | Tomato | nucleus, plastid | 30.1 | 37.13 |
| KRH36195 | Soybean | extracellular | 33.01 | 36.76 |
| Os01t0839100-01 | Rice | nucleus | 28.64 | 34.5 |
| Os05t0114400-01 | Rice | nucleus | 32.52 | 33.84 |
| Os03t0279700-01 | Rice | nucleus | 31.07 | 33.51 |
| Os03t0820400-01 | Rice | nucleus | 22.82 | 32.64 |
| Os11t0702300-00 | Rice | nucleus | 24.27 | 30.67 |
| Os11t0702400-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 24.27 | 29.41 |
| Os03t0820300-01 | Rice | nucleus | 24.27 | 29.41 |
| PGSC0003DMT400060463 | Potato | nucleus | 29.13 | 28.85 |
| Os05t0460900-00 | Rice | cytosol | 22.82 | 27.01 |
| Os04t0162500-01 | Rice | vacuole | 28.16 | 20.07 |
| Os02t0823900-00 | Rice | cytosol, nucleus, peroxisome | 27.18 | 16.28 |
Protein Annotations
| EnsemblPlants:Os05t0461200-00 | EnsemblPlantsGene:Os05g0461200 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF202 | PFAM:PF13912 | PFscan:PS50157 |
| ProteinID:BAS94411.1 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000152B4B2 |
| UniProt:A0A0P0WND1 | MapMan:15.5.15 | : | : | : | : |
Description
Zinc finger, C2H2 domain containing protein. (Os05t0461200-00)
Coordinates
chr5:+:22648416..22649036
Molecular Weight (calculated)
21644.9 Da
IEP (calculated)
10.655
GRAVY (calculated)
-0.397
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKRQFGEMD GGIDTARVLM LLSRRRRQHG DVGHARAARV FECRTCGRRF PTFQALGGHR ASHKRPRHGA ERAPRPAGDD DVGAGAGAAL RLVGAASSLS
101: TDEARAGGGG RRTRGAGAAH GCPVCGLEFA VGQALGGHMR RHRAAAGDVA APRVKTDDVV VGDECTGGIC LDLNLTPSEN CDKCRHAQLG VAVNSVQRTI
201: LLDRPL
101: TDEARAGGGG RRTRGAGAAH GCPVCGLEFA VGQALGGHMR RHRAAAGDVA APRVKTDDVV VGDECTGGIC LDLNLTPSEN CDKCRHAQLG VAVNSVQRTI
201: LLDRPL
001: MMMGQDEVGS DQTQIIKGKR TKRQRSSSTF VVTAATTVTS TSSSAGGSGG ERAVSDEYNS AVSSPVTTDC TQEEEDMAIC LIMLARGTVL PSPDLKNSRK
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY
Arabidopsis Description
ZAT5Zinc finger protein ZAT5 [Source:UniProtKB/Swiss-Prot;Acc:Q681X4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.