Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400018457 | Potato | nucleus | 92.94 | 92.1 |
| Solyc11g066400.1.1 | Tomato | nucleus, plastid | 49.08 | 54.42 |
| HORVU4Hr1G082500.1 | Barley | nucleus | 11.35 | 53.62 |
| HORVU5Hr1G095320.1 | Barley | nucleus | 11.35 | 53.62 |
| HORVU1Hr1G012760.1 | Barley | nucleus | 11.04 | 52.17 |
| HORVU3Hr1G057300.1 | Barley | nucleus | 11.04 | 52.17 |
| VIT_06s0061g00760.t01 | Wine grape | nucleus | 43.87 | 49.48 |
| HORVU5Hr1G095390.1 | Barley | nucleus | 11.35 | 48.05 |
| HORVU5Hr1G095330.1 | Barley | nucleus | 11.35 | 48.05 |
| HORVU1Hr1G020710.1 | Barley | nucleus | 11.35 | 48.05 |
| Solyc05g054650.1.1 | Tomato | plastid | 21.47 | 46.05 |
| HORVU2Hr1G122100.1 | Barley | nucleus, plastid | 10.74 | 45.45 |
| Solyc05g054660.1.1 | Tomato | nucleus, plastid | 21.47 | 41.92 |
| Solyc06g075780.1.1 | Tomato | nucleus | 19.63 | 41.56 |
| Solyc11g073060.1.1 | Tomato | nucleus | 19.33 | 40.91 |
| KRH30555 | Soybean | nucleus | 37.12 | 39.29 |
| KRH26537 | Soybean | nucleus, plastid | 37.42 | 38.98 |
| KRH22825 | Soybean | nucleus | 37.12 | 38.41 |
| Solyc09g008440.1.1 | Tomato | nucleus | 35.89 | 37.74 |
| KRH25111 | Soybean | nucleus, plastid | 36.2 | 37.46 |
| Zm00001d036330_P001 | Maize | nucleus | 27.61 | 36.59 |
| KXG20985 | Sorghum | nucleus, plastid | 28.83 | 34.18 |
| Zm00001d051865_P001 | Maize | nucleus | 34.36 | 33.94 |
| Zm00001d004439_P001 | Maize | nucleus | 35.28 | 32.03 |
| TraesCS2A01G002400.1 | Wheat | nucleus | 33.13 | 31.58 |
| Os04t0162500-01 | Rice | vacuole | 27.91 | 31.49 |
| Os02t0823900-00 | Rice | cytosol, nucleus, peroxisome | 33.13 | 31.4 |
| HORVU6Hr1G092750.1 | Barley | nucleus | 34.36 | 31.02 |
| Solyc05g055500.1.1 | Tomato | nucleus | 34.36 | 30.94 |
| TraesCS6A01G404600.1 | Wheat | nucleus | 34.36 | 30.52 |
| TraesCS6B01G448900.1 | Wheat | nucleus | 34.05 | 30.41 |
| TraesCS6D01G387900.1 | Wheat | nucleus | 34.05 | 30.33 |
| TraesCS2B01G020300.1 | Wheat | nucleus | 33.44 | 29.86 |
| Zm00001d024866_P001 | Maize | nucleus | 33.44 | 29.78 |
| Solyc03g093870.1.1 | Tomato | nucleus | 15.34 | 28.74 |
| EES07783 | Sorghum | nucleus | 34.36 | 28.64 |
| EES10410 | Sorghum | nucleus | 34.66 | 28.18 |
Protein Annotations
| EnsemblPlants:Solyc06g074800.1.1 | EnsemblPlantsGene:Solyc06g074800.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type |
| PANTHER:PTHR26374 | PANTHER:PTHR26374:SF308 | PFAM:PF13912 | PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0002766795 | UniProt:K4C9J6 | MapMan:15.5.15 | : |
Description
No Description!
Coordinates
chr6:-:46333696..46334676
Molecular Weight (calculated)
35816.3 Da
IEP (calculated)
6.835
GRAVY (calculated)
-0.802
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFSEDSIDR TLVFKGKRSK RPRQFMAVAM VTSTSSTAAA DDSAGGGGSG GDGGEDVYNY SSSMQYSSST TSTTQISTTS STEEDEDMAN CLILLAQSGR
101: CQKLQVESTE RKMVKISSRK FTEMATTTPG KAGFYVYECK TCNRTFPSFQ ALGGHRTSHK KIKTEEKKST ADSVSPSIDH HHQQQQQEEK INRIVTAPTQ
201: IVNKGNSNLH SNLINKQPKI HECSICGAEF SSGQALGGHM RRHRPPTITA TNTKITVDET SNNTSDNLSH DDDQNSKKPK LFLSLDLNLP ASPEDDHHRD
301: DNNNFEFSAN QQSLLFSAAA LVDCHY
101: CQKLQVESTE RKMVKISSRK FTEMATTTPG KAGFYVYECK TCNRTFPSFQ ALGGHRTSHK KIKTEEKKST ADSVSPSIDH HHQQQQQEEK INRIVTAPTQ
201: IVNKGNSNLH SNLINKQPKI HECSICGAEF SSGQALGGHM RRHRPPTITA TNTKITVDET SNNTSDNLSH DDDQNSKKPK LFLSLDLNLP ASPEDDHHRD
301: DNNNFEFSAN QQSLLFSAAA LVDCHY
001: MMMGQDEVGS DQTQIIKGKR TKRQRSSSTF VVTAATTVTS TSSSAGGSGG ERAVSDEYNS AVSSPVTTDC TQEEEDMAIC LIMLARGTVL PSPDLKNSRK
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY
Arabidopsis Description
ZAT5Zinc finger protein ZAT5 [Source:UniProtKB/Swiss-Prot;Acc:Q681X4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.