Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400090011 | Potato | nucleus | 63.79 | 71.61 |
| PGSC0003DMT400021456 | Potato | nucleus | 76.44 | 69.27 |
| Solyc11g073060.1.1 | Tomato | nucleus | 35.06 | 39.61 |
| Solyc06g075780.1.1 | Tomato | nucleus | 32.76 | 37.01 |
| CDY04582 | Canola | nucleus | 31.61 | 36.67 |
| CDY15775 | Canola | nucleus | 31.61 | 36.67 |
| Bra011931.1-P | Field mustard | cytosol | 31.61 | 36.67 |
| CDX77198 | Canola | nucleus | 31.03 | 36.49 |
| AT2G28710.1 | Thale cress | nucleus | 32.18 | 35.9 |
| CDY31725 | Canola | nucleus | 30.46 | 35.81 |
| Bra035678.1-P | Field mustard | nucleus | 30.46 | 35.81 |
| Solyc05g054650.1.1 | Tomato | plastid | 31.03 | 35.53 |
| Solyc05g054660.1.1 | Tomato | nucleus, plastid | 29.89 | 31.14 |
| GSMUA_Achr8P02630_001 | Banana | nucleus | 13.22 | 23.0 |
| GSMUA_Achr6P34280_001 | Banana | cytosol, mitochondrion, nucleus | 13.79 | 21.82 |
| Solyc11g066400.1.1 | Tomato | nucleus, plastid | 28.74 | 17.01 |
| Solyc09g008440.1.1 | Tomato | nucleus | 27.59 | 15.48 |
| Solyc06g074800.1.1 | Tomato | nucleus | 28.74 | 15.34 |
| Solyc05g055500.1.1 | Tomato | nucleus | 26.44 | 12.71 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR013087 | UniProt:K4BIR3 |
| PFAM:PF13912 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF322 | SMART:SM00355 |
| SUPFAM:SSF57667 | EnsemblPlantsGene:Solyc03g093870.1 | EnsemblPlants:Solyc03g093870.1.1 | UniParc:UPI0002767660 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3:+:55537286..55537810
Molecular Weight (calculated)
19940.3 Da
IEP (calculated)
9.305
GRAVY (calculated)
-0.749
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MNMMLKRSKV EEESVEKFAM ANCADIMKRN ELLERPNLIF KCKKRFESFQ ALGGHMTSHK NKLTTMSTNG ELLHVNLQKH ECSICGKKFA TGQALGGHMR
101: KHQDELNQLE HKKKKKMKLD ESLIKSGREL AEALNSKSDE LHDKLDLESS KRTLFLGLNL DLNLTIDENE LRTG
101: KHQDELNQLE HKKKKKMKLD ESLIKSGREL AEALNSKSDE LHDKLDLESS KRTLFLGLNL DLNLTIDENE LRTG
001: MKRERSDFEE SLKNIDIAKC LMILAQTSMV KQIGLNQHTE SHTSNQFECK TCNKRFSSFQ ALGGHRASHK KPKLTVEQKD VKHLSNDYKG NHFHKCSICS
101: QSFGTGQALG GHMRRHRSSM TVEPSFISPM IPSMPVLKRC GSSKRILSLD LNLTPLENDL EYIFGKTFVP KIDMKFVL
101: QSFGTGQALG GHMRRHRSSM TVEPSFISPM IPSMPVLKRC GSSKRILSLD LNLTPLENDL EYIFGKTFVP KIDMKFVL
Arabidopsis Description
ZAT11ZAT11 [Source:UniProtKB/TrEMBL;Acc:A0A178VNJ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.