Factsheet for Zm00001d047786_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92453	Sorghum	nucleus	84.92	85.79
Zm00001d028667_P001	Maize	nucleus	76.88	84.07
TraesCS4A01G101000.1	Wheat	nucleus	63.82	69.78
TraesCS4B01G203400.1	Wheat	nucleus	63.32	68.85
HORVU4Hr1G058720.1	Barley	nucleus	62.31	66.31
TraesCS4D01G204300.1	Wheat	nucleus	60.3	66.3
Os03t0279700-01	Rice	nucleus	60.8	63.35
TraesCS4A01G101100.1	Wheat	nucleus	59.8	62.3
HORVU4Hr1G058690.1	Barley	nucleus	58.79	62.23
PGSC0003DMT400060523	Potato	mitochondrion	35.68	51.45
GSMUA_Achr9P03210_001	Banana	nucleus	36.18	51.43
KRH01600	Soybean	cytosol, extracellular, nucleus	41.21	46.86
Solyc05g054650.1.1	Tomato	plastid	35.18	46.05
KRH70509	Soybean	nucleus	41.21	45.56
VIT_13s0019g00480.t01	Wine grape	nucleus	39.7	44.89
VIT_06s0004g04180.t01	Wine grape	nucleus	35.18	44.03
KRG90559	Soybean	nucleus	38.19	43.93
Zm00001d034639_P001	Maize	nucleus	32.66	43.33
Solyc05g054660.1.1	Tomato	nucleus, plastid	34.67	41.32
Zm00001d035609_P001	Maize	nucleus	40.7	40.91
KRH36195	Soybean	extracellular	37.69	40.54
Zm00001d012430_P001	Maize	nucleus	37.19	35.07
Zm00001d012967_P001	Maize	plastid	21.61	34.13
Zm00001d012427_P001	Maize	nucleus	27.64	32.54
Zm00001d034642_P001	Maize	nucleus, plastid	23.62	32.41
Zm00001d042934_P001	Maize	nucleus	36.18	32.0
PGSC0003DMT400060463	Potato	nucleus	33.17	31.73
Zm00001d042933_P001	Maize	nucleus	28.64	31.32
Zm00001d038379_P001	Maize	nucleus	28.14	30.11
Zm00001d034641_P001	Maize	nucleus	24.12	27.75
Zm00001d012968_P001	Maize	nucleus	24.12	27.43
Zm00001d036330_P001	Maize	nucleus	33.67	27.24
Zm00001d045211_P001	Maize	nucleus	21.61	24.16
Zm00001d051865_P001	Maize	nucleus	31.16	18.79
Zm00001d004439_P001	Maize	nucleus	32.66	18.11
Zm00001d024866_P001	Maize	nucleus	33.17	18.03

Protein Annotations

EnsemblPlants:Zm00001d047786_P001	EnsemblPlants:Zm00001d047786_T001	EnsemblPlantsGene:Zm00001d047786	EntrezGene:103639302	Gene3D:3.30.160.60	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR26374
PANTHER:PTHR26374:SF162	PFAM:PF13912	PFscan:PS50157	ProteinID:AQL07606.1	ScanProsite:PS00028	SEG:seg
SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI000221F4D4	UniProt:K7VF20	MapMan:15.5.15	:

Description

Zinc finger protein ZAT11

Coordinates

chr9:+:141773136..141773735

Molecular Weight (calculated)

21068.0 Da

IEP (calculated)

6.941

GRAVY (calculated)

-0.251

Length

199 amino acids

Sequence
(BLAST)

001: MAYGKRSRQK AEEMVWLPDG ADVARFLLLF SGHQHYHGAS GAASTDAAAS APERVFECKT CSRQFPSFQA LGGHRASHKK PRLADGGVDA AAAAEPPKTK
101: PKVHGCSICG LEFAIGQALG GHMRRHRAAE AEDAVGGSPG LGLDLSLGPK RDRVSKATVP SVDLVLDLNA VPEELDEEQD CAKLGLSIDF PVAVVDFLR

Best Arabidopsis Sequence Match ( AT2G28710.1 )
(BLAST)

001: MERGRSDMEM INNMANCLIL LSKAHQNDTK SRVFACKTCN KEFPSFQALG GHRASHRRSA ALEGHAPPSP KRVKPVKHEC PICGAEFAVG QALGGHMRKH
101: RGGSGGGGGR SLAPATAPVT MKKSGGGNGK RVLCLDLNLT PLENEDLKLE LGRFIF

Arabidopsis Description

At2g28710 [Source:UniProtKB/TrEMBL;Acc:Q9SI97]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.