Factsheet for Zm00001d028667_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92453	Sorghum	nucleus	90.11	83.25
Zm00001d047786_P001	Maize	nucleus	84.07	76.88
TraesCS4A01G101000.1	Wheat	nucleus	66.48	66.48
TraesCS4B01G203400.1	Wheat	nucleus	66.48	66.12
TraesCS4D01G204300.1	Wheat	nucleus	64.29	64.64
Os03t0279700-01	Rice	nucleus	67.03	63.87
HORVU4Hr1G058720.1	Barley	nucleus	65.38	63.64
HORVU4Hr1G058690.1	Barley	nucleus	63.19	61.17
TraesCS4A01G101100.1	Wheat	nucleus	63.74	60.73
PGSC0003DMT400060523	Potato	mitochondrion	39.56	52.17
GSMUA_Achr9P03210_001	Banana	nucleus	38.46	50.0
Solyc05g054650.1.1	Tomato	plastid	39.01	46.71
KRH01600	Soybean	cytosol, extracellular, nucleus	44.51	46.29
KRH70509	Soybean	nucleus	45.05	45.56
VIT_06s0004g04180.t01	Wine grape	nucleus	39.01	44.65
KRG90559	Soybean	nucleus	41.76	43.93
VIT_13s0019g00480.t01	Wine grape	nucleus	41.76	43.18
Solyc05g054660.1.1	Tomato	nucleus, plastid	38.46	41.92
Zm00001d034639_P001	Maize	nucleus	34.07	41.33
KRH36195	Soybean	extracellular	41.21	40.54
Zm00001d035609_P001	Maize	nucleus	43.41	39.9
Zm00001d012430_P001	Maize	nucleus	39.56	34.12
Zm00001d012967_P001	Maize	plastid	23.08	33.33
PGSC0003DMT400060463	Potato	nucleus	36.81	32.21
Zm00001d034642_P001	Maize	nucleus, plastid	25.27	31.72
Zm00001d042934_P001	Maize	nucleus	38.46	31.11
Zm00001d012427_P001	Maize	nucleus	28.57	30.77
Zm00001d038379_P001	Maize	nucleus	30.22	29.57
Zm00001d042933_P001	Maize	nucleus	28.57	28.57
Zm00001d034641_P001	Maize	nucleus	25.82	27.17
Zm00001d012968_P001	Maize	nucleus	25.82	26.86
Zm00001d036330_P001	Maize	nucleus	35.71	26.42
Zm00001d045211_P001	Maize	nucleus	23.08	23.6
Zm00001d051865_P001	Maize	nucleus	34.07	18.79
Zm00001d004439_P001	Maize	nucleus	34.62	17.55
Zm00001d024866_P001	Maize	nucleus	35.16	17.49

Protein Annotations

EnsemblPlants:Zm00001d028667_P001	EnsemblPlants:Zm00001d028667_T001	EnsemblPlantsGene:Zm00001d028667	EntrezGene:103634472	Gene3D:3.30.160.60	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR26374
PANTHER:PTHR26374:SF162	PFAM:PF13912	PFscan:PS50157	ProteinID:ONL96683.1	ScanProsite:PS00028	SMART:SM00355
SUPFAM:SSF57667	UniParc:UPI0002214077	UniProt:A0A1D6JYE2	MapMan:15.5.15	:	:

Description

zinc finger protein4Zinc finger protein ZAT11

Coordinates

chr1:-:42392374..42392922

Molecular Weight (calculated)

19656.2 Da

IEP (calculated)

6.853

GRAVY (calculated)

-0.431

Length

182 amino acids

Sequence
(BLAST)

001: MAYGKRSRQK AEEMVWLPDG ADVARFLLLF SGHQHYHGDG MAASAPERVF ECKTCNRQFP SFQALGGHRA SHKKPRLSDG VDAAAAEPPK PKVHGCSICG
101: LEFAIGQALG GHMRRHRAAD QTDGGSLGTG LTPKYDSGKT AASPAELVLD LNAVPELEEE QDHAKLELSI EFPVAVVDFH AR

Best Arabidopsis Sequence Match ( AT5G59820.1 )
(BLAST)

001: MVAISEIKST VDVTAANCLM LLSRVGQENV DGGDQKRVFT CKTCLKQFHS FQALGGHRAS HKKPNNDALS SGLMKKVKTS SHPCPICGVE FPMGQALGGH
101: MRRHRNESGA AGGALVTRAL LPEPTVTTLK KSSSGKRVAC LDLSLGMVDN LNLKLELGRT VY

Arabidopsis Description

ZAT12Zinc finger protein ZAT12 [Source:UniProtKB/Swiss-Prot;Acc:Q42410]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.