CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 2
mitochondrion 4
plastid 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH10294
KRH23029
KRH24731
KRH24732
KRH24733
KRH24840
KRH29740
KRH29844

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G06060.1	KRH24731	AT2G29330.1	21798944
AT5G06060.1	KRH24732	AT2G29330.1	21798944
AT5G06060.1	KRH24733	AT2G29330.1	21798944
AT5G06060.1	KRH29740	AT2G29330.1	21798944
AT5G06060.1	KRH24731	AT2G29360.1	21798944
AT5G06060.1	KRH24732	AT2G29360.1	21798944
AT5G06060.1	KRH24733	AT2G29360.1	21798944
AT5G06060.1	KRH29740	AT2G29360.1	21798944
AT5G06060.1	KRH10294	AT3G46090.1	17259181
AT5G06060.1	KRH23029	AT3G46090.1	17259181
AT5G06060.1	KRH24840	AT3G46090.1	17259181
AT5G06060.1	KRH29844	AT3G46090.1	17259181

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97870	Soybean	mitochondrion	78.23	84.8
KRG97856	Soybean	mitochondrion, plastid	71.59	71.32
KRH31026	Soybean	cytosol, mitochondrion, peroxisome, plastid	70.48	70.22
VIT_13s0019g02180.t01	Wine grape	peroxisome, plasma membrane, plastid	67.53	68.28
KRH31025	Soybean	plastid	69.74	68.23
Solyc03g096640.2.1	Tomato	mitochondrion, plastid	66.79	67.54
AT5G06060.1	Thale cress	peroxisome	65.68	67.42
PGSC0003DMT400043159	Potato	mitochondrion	66.79	67.29
CDY04977	Canola	peroxisome	64.58	66.54
CDY14094	Canola	peroxisome	64.58	66.54
GSMUA_Achr10P...	Banana	cytosol	66.42	66.42
Bra028744.1-P	Field mustard	cytosol	64.21	66.16
CDX98899	Canola	peroxisome	63.1	65.27
VIT_13s0019g02140.t01	Wine grape	peroxisome	64.94	64.94
HORVU4Hr1G060350.3	Barley	plastid	64.58	64.34
TraesCS4A01G094400.1	Wheat	plastid	64.21	63.97
Bra009159.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	61.62	63.74
CDX70101	Canola	peroxisome	61.62	63.74
TraesCS4D01G210800.1	Wheat	plastid	63.84	63.6
TraesCS4B01G210000.1	Wheat	plastid	63.84	63.6
Os03t0268900-02	Rice	plastid	63.1	63.33
VIT_13s0019g02130.t01	Wine grape	peroxisome	62.36	63.06
Os03t0269000-01	Rice	plastid	49.45	62.91
Zm00001d028575_P001	Maize	extracellular	63.1	62.64
TraesCS4A01G094500.1	Wheat	cytosol, peroxisome, plastid	61.99	61.99
TraesCS4B01G209900.1	Wheat	peroxisome	61.62	61.85
KRH31021	Soybean	mitochondrion	69.0	61.72
PGSC0003DMT400043152	Potato	peroxisome	62.73	61.37
CDY04975	Canola	mitochondrion	25.09	60.71
KRG97857	Soybean	mitochondrion	55.35	60.0
KRH24731	Soybean	nucleus	57.93	58.8
KRH24733	Soybean	nucleus	56.09	57.36
Solyc03g096660.1.1	Tomato	extracellular	40.59	56.41
KRH24734	Soybean	extracellular, plasma membrane, vacuole	23.62	56.14
KRH00026	Soybean	cytosol, mitochondrion, peroxisome	54.61	56.06
VIT_13s0019g02170.t01	Wine grape	mitochondrion, nucleus, peroxisome, plastid	58.67	55.79
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	54.61	55.02
EES08074	Sorghum	plastid	60.15	54.15
KRH29740	Soybean	cytosol	19.56	54.08
OQU92858	Sorghum	cytosol, peroxisome, plastid	61.25	53.9
TraesCS4D01G210700.1	Wheat	plastid	61.99	53.0
KRH00030	Soybean	cytosol	51.66	52.63
Os03t0269100-02	Rice	mitochondrion, plastid	59.78	52.6
KRH29741	Soybean	plastid	59.41	52.44
KRH49153	Soybean	cytosol	50.92	51.88
KRH49151	Soybean	mitochondrion	49.82	50.94
KRH00029	Soybean	peroxisome	18.08	50.0
CDX98898	Canola	cytosol, peroxisome, plasma membrane	56.46	49.35
HORVU4Hr1G060330.1	Barley	mitochondrion	57.93	49.06
KRH49156	Soybean	plastid	30.26	47.95
KRH49152	Soybean	cytosol	50.55	46.44
KRH00032	Soybean	cytosol, peroxisome, plastid	28.41	42.78
OQU91956	Sorghum	extracellular, peroxisome	46.86	39.69
KRH02005	Soybean	endoplasmic reticulum, nucleus	30.26	32.54
KRH36525	Soybean	endoplasmic reticulum	28.78	30.59
KRH11511	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	28.78	30.59
KRH70902	Soybean	cytosol	11.07	27.27
KRG96884	Soybean	cytosol	28.04	25.76
KRH33956	Soybean	endoplasmic reticulum	27.31	25.26
KRG92837	Soybean	endoplasmic reticulum, nucleus	27.31	25.26
KRH68572	Soybean	cytosol	26.57	24.0
KRH68573	Soybean	cytosol	24.35	24.0
KRH68615	Soybean	cytosol, nucleus, plastid	19.19	23.53
KRH51046	Soybean	cytosol, peroxisome, plastid	27.68	23.51
KRH44885	Soybean	nucleus	25.09	22.82
KRH13054	Soybean	nucleus	24.35	22.15

Protein Annotations

EMBL:ACUP02007117	EnsemblPlants:KRH31007	EnsemblPlantsGene:GLYMA_11G221400	EntrezGene:100819646	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf
InterPro:SDR_fam	PANTHER:PTHR42898	PANTHER:PTHR42898:SF3	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081
ProteinID:KRH31007	ProteinID:KRH31007.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI00017622FA	UniProt:A0A0R0HXT4
MapMan:50.1.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:-:31655115..31658019

Molecular Weight (calculated)

29039.5 Da

IEP (calculated)

7.368

GRAVY (calculated)

-0.051

Length

271 amino acids

Sequence
(BLAST)

001: MANPEGSSRG SRWSLKGTTA LVTGGTRGIG HAVVEELAEF GATVYTCSRN EEELNACLKE WKEKGFSVSG LVCDASSPPH RENLIQQVAS AFNGKLNILV
101: NNVGTNVRKP TIEYTAEEYS KLMATNLDST YHLCQLAYPL LKASGNGSIV SISSVASQTS VGSGAIYAAT KAAIDQLTKY FACEWAKDNI RSNGVAPWYT
201: ITSLVEPLLA NKQLVSEIIS RTPIKRMAET HEVSSLVTFL CLPAASYITG QIVSVDGGFT ANGFQPSMRI S

Best Arabidopsis Sequence Match ( AT1G07440.1 )
(BLAST)

001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG

Arabidopsis Description

Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.