CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, peroxisome

Predictor Summary:

nucleus 1
mitochondrion 3
peroxisome 2
extracellular 2
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, peroxisome
Any Predictor:	mitochondrion, nucleus, peroxisome, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0268900-02	Rice	plastid	51.25	60.74
GSMUA_Achr10P...	Banana	cytosol	45.94	54.24
Solyc03g096640.2.1	Tomato	mitochondrion, plastid	43.75	52.24
AT5G06060.1	Thale cress	peroxisome	42.81	51.89
VIT_13s0019g02180.t01	Wine grape	peroxisome, plasma membrane, plastid	43.44	51.87
PGSC0003DMT400043159	Potato	mitochondrion	43.12	51.3
CDX98899	Canola	peroxisome	41.56	50.76
CDY04977	Canola	peroxisome	41.56	50.57
CDY14094	Canola	peroxisome	41.25	50.19
Bra009159.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	40.62	49.62
CDX70101	Canola	peroxisome	40.62	49.62
Bra028744.1-P	Field mustard	cytosol	40.62	49.43
OQU92858	Sorghum	cytosol, peroxisome, plastid	47.5	49.35
VIT_13s0019g02130.t01	Wine grape	peroxisome	40.62	48.51
Solyc03g096660.1.1	Tomato	extracellular	29.38	48.21
CDY04975	Canola	mitochondrion	16.56	47.32
EES08074	Sorghum	plastid	44.38	47.18
KRH31026	Soybean	cytosol, mitochondrion, peroxisome, plastid	40.0	47.06
VIT_13s0019g02140.t01	Wine grape	peroxisome	39.69	46.86
KRH31007	Soybean	mitochondrion	39.69	46.86
KRH31025	Soybean	plastid	40.31	46.57
PGSC0003DMT400043152	Potato	peroxisome	40.31	46.57
KRG97856	Soybean	mitochondrion, plastid	39.38	46.32
VIT_13s0019g02170.t01	Wine grape	mitochondrion, nucleus, peroxisome, plastid	40.0	44.91
KRG97870	Soybean	mitochondrion	35.0	44.8
KRG97857	Soybean	mitochondrion	34.69	44.4
EES10198	Sorghum	mitochondrion, plastid	36.56	43.17
EES10199	Sorghum	mitochondrion	35.62	42.86
EES10195	Sorghum	mitochondrion	35.0	42.42
KXG29038	Sorghum	mitochondrion, plastid	34.69	42.05
KRH31021	Soybean	mitochondrion	39.69	41.91
CDX98898	Canola	cytosol, peroxisome, plasma membrane	38.75	40.0
KXG34055	Sorghum	plastid	34.38	39.71
KXG29040	Sorghum	cytosol, peroxisome, plastid	29.38	38.84
OQU84126	Sorghum	peroxisome	31.56	35.56
EES19901	Sorghum	peroxisome	23.75	30.04
EER98384	Sorghum	peroxisome	23.12	29.25
EES11416	Sorghum	mitochondrion, peroxisome, plastid	20.0	21.55
EES11417	Sorghum	peroxisome	19.69	21.21
OQU77380	Sorghum	mitochondrion	18.44	18.04

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	UniProt:A0A1Z5S7Z7	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114
InterPro:NAD(P)-bd_dom_sf	EnsemblPlants:OQU91956	ProteinID:OQU91956	ProteinID:OQU91956.1	PFAM:PF13561	PRINTS:PR00080
PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR42898	PANTHER:PTHR42898:SF14	InterPro:SDR_fam	EnsemblPlantsGene:SORBI_3001G264100
SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	TMHMM:TMhelix	UniParc:UPI000B8BA0BD	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:-:49012702..49021425

Molecular Weight (calculated)

34596.8 Da

IEP (calculated)

7.866

GRAVY (calculated)

0.060

Length

320 amino acids

Sequence
(BLAST)

001: MVTPREDSSR HWGHPWHWVS LPACLIPTHV LPASTLVLIS KLSRRELGFE CFSFSVPSIC RVVEELLALG AAVHTCTFNE AELNERLKDW HARGCRVTGS
101: VCDVSMKEQR EHLVRDVACQ FGGKLDILVD NAGICIRKSA MEHSAEEYSI VMATNLEPAY HLSLLSHPLL KASGSGSIVF ISSIAGVVAL FSGPIYGMTK
201: AGMNQLAKNL ACEWAKDNIR INSIAPGYIS TSLTEGVFSN KELRDNILSR APLRRAGEPE EISSIVAFLC MPGSTYTATR SGRACCPGSR AGAALPGLKA
301: HPLVPVRATG AEAPPFNTGW

Best Arabidopsis Sequence Match ( AT1G07440.1 )
(BLAST)

001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG

Arabidopsis Description

Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.