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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 2
  • mitochondrion 2
  • peroxisome 2
  • plastid 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid
BaCelLo:cytosol
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:peroxisome
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_06s0004g05310.t01
VIT_06s0004g05320.t01
VIT_06s0004g05330.t01
VIT_06s0004g05360.t01
VIT_06s0004g05370.t01
VIT_06s0004g05380.t01
VIT_06s0004g05390.t01
VIT_06s0004g05400.t01
VIT_06s0004g05430.t01
VIT_06s0004g05440.t01
VIT_06s0004g05450.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G06060.1 VIT_06s0004g05310.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05320.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05330.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05360.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05370.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05380.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05390.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05400.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05430.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05440.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05450.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05310.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05320.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05330.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05360.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05370.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05380.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05390.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05400.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05430.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05440.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05450.t01 AT2G29360.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_13s0019g02130.t01 Wine grape peroxisome 87.45 88.43
VIT_13s0019g02180.t01 Wine grape peroxisome, plasma membrane, plastid 69.37 70.15
VIT_06s0004g05440.t01 Wine grape cytosol 21.03 69.51
GSMUA_Achr10P... Banana cytosol 66.05 66.05
VIT_06s0004g05400.t01 Wine grape cytosol 26.94 65.77
VIT_06s0004g05380.t01 Wine grape plastid 65.31 65.56
VIT_06s0004g05320.t01 Wine grape endoplasmic reticulum, peroxisome, plastid 60.89 65.48
VIT_06s0004g05370.t01 Wine grape peroxisome 60.89 65.48
KRH31007 Soybean mitochondrion 64.94 64.94
VIT_06s0004g05310.t01 Wine grape cytosol 26.94 64.6
AT5G06060.1 Thale cress peroxisome 62.73 64.39
HORVU4Hr1G060350.3 Barley plastid 64.58 64.34
KRG97856 Soybean mitochondrion, plastid 64.58 64.34
VIT_06s0004g05430.t01 Wine grape mitochondrion, nucleus, peroxisome 63.47 63.7
Os03t0268900-02 Rice plastid 63.47 63.7
TraesCS4A01G094400.1 Wheat plastid 63.84 63.6
CDY04977 Canola peroxisome 61.62 63.5
KRH31026 Soybean cytosol, mitochondrion, peroxisome, plastid 63.47 63.24
TraesCS4D01G210800.1 Wheat plastid 63.47 63.24
PGSC0003DMT400043159 Potato mitochondrion 62.73 63.2
CDY14094 Canola peroxisome 61.25 63.12
Solyc03g096640.2.1 Tomato mitochondrion, plastid 62.36 63.06
CDX98899 Canola peroxisome 60.89 62.98
TraesCS4B01G210000.1 Wheat plastid 63.1 62.87
Bra028744.1-P Field mustard cytosol 60.89 62.74
KRH31025 Soybean plastid 63.47 62.09
TraesCS4A01G094500.1 Wheat cytosol, peroxisome, plastid 61.62 61.62
TraesCS4B01G209900.1 Wheat peroxisome 61.25 61.48
VIT_06s0004g05360.t01 Wine grape cytosol, mitochondrion, plastid 54.24 61.25
VIT_06s0004g05280.t01 Wine grape cytosol, nucleus, peroxisome 56.83 61.11
VIT_06s0004g05330.t01 Wine grape peroxisome 57.2 61.02
Zm00001d028575_P001 Maize extracellular 61.25 60.81
Bra009159.1-P Field mustard cytosol, mitochondrion, peroxisome, plasma membrane 58.67 60.69
CDX70101 Canola peroxisome 58.67 60.69
VIT_08s0007g00890.t01 Wine grape peroxisome 55.72 60.4
VIT_08s0007g00900.t01 Wine grape mitochondrion, plastid 58.3 60.31
Os03t0269000-01 Rice plastid 47.23 60.09
CDY04975 Canola mitochondrion 24.72 59.82
KRG97870 Soybean mitochondrion 54.61 59.2
VIT_13s0019g02170.t01 Wine grape mitochondrion, nucleus, peroxisome, plastid 61.62 58.6
PGSC0003DMT400043152 Potato peroxisome 59.41 58.12
VIT_08s0007g00920.t01 Wine grape peroxisome 56.46 57.3
KRG97857 Soybean mitochondrion 52.4 56.8
Solyc03g096660.1.1 Tomato extracellular 40.59 56.41
EES08074 Sorghum plastid 62.36 56.15
KRH31021 Soybean mitochondrion 60.89 54.46
Os03t0269100-02 Rice mitochondrion, plastid 61.62 54.22
VIT_06s0004g05390.t01 Wine grape cytosol, plasma membrane, plastid 48.71 53.66
OQU92858 Sorghum cytosol, peroxisome, plastid 60.89 53.57
VIT_06s0004g05450.t01 Wine grape plasma membrane 35.42 53.33
TraesCS4D01G210700.1 Wheat plastid 62.36 53.31
HORVU4Hr1G060330.1 Barley mitochondrion 58.3 49.38
CDX98898 Canola cytosol, peroxisome, plasma membrane 55.35 48.39
OQU91956 Sorghum extracellular, peroxisome 46.86 39.69
VIT_17s0000g08740.t01 Wine grape cytosol 12.92 28.46
VIT_01s0011g01520.t01 Wine grape peroxisome 28.04 25.59
VIT_19s0085g00500.t01 Wine grape peroxisome 27.68 25.25
VIT_14s0128g00340.t01 Wine grape plastid 27.68 21.99
VIT_00s0516g00030.t01 Wine grape cytosol, peroxisome 26.94 7.09
Protein Annotations
EntrezGene:100249681wikigene:100249681Gene3D:3.40.50.720MapMan:50.1.1ProteinID:CBI31632ProteinID:CBI31632.3
UniProt:D7TLP5EMBL:FN595998GO:GO:0003674GO:GO:0003676GO:GO:0003824GO:GO:0005488
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0055114EntrezGene:LOC100249681wikigene:LOC100249681
InterPro:NAD(P)-bd_dom_sfPFAM:PF13561PRINTS:PR00080PRINTS:PR00081ScanProsite:PS00061PANTHER:PTHR42898
PANTHER:PTHR42898:SF3InterPro:SDR_famSUPFAM:SSF51735InterPro:Sc_DH/Rdtase_CSTIGR:TC70000TMHMM:TMhelix
UniParc:UPI00015C975CArrayExpress:VIT_13s0019g02140EnsemblPlantsGene:VIT_13s0019g02140EnsemblPlants:VIT_13s0019g02140.t01unigene:Vvi.17485RefSeq:XP_002282875
RefSeq:XP_002282875.1SEG:seg::::
Description
No Description!
Coordinates
chr13:+:3441789..3443686
Molecular Weight (calculated)
28714.5 Da
IEP (calculated)
5.978
GRAVY (calculated)
0.111
Length
271 amino acids
Sequence
(BLAST)
001: MMPAAESSCS DLRWSLKGAT ALVTGGTLGI GYAIVEELAG MGAAVYTCSR TESKLNNLLR DWNAKGFDVR GSVCDVSDRA QREQLIEKVS SGFNGKLNIL
101: INNVGTNFSK PTIEYTAADF SALMATNIES GYHLCQLAYP LLKASGAGSI VFISSVAGVV STGTGSIYAA TKAAMNQITK SLACEWAKDN IRSNCVAPFC
201: TRTPLIEQML AKKSMMEEVV SRTPLGRPGE PQEISSLATF LCMPCASYIT GQVISVDGGL TANAFSPPIY D
Best Arabidopsis Sequence Match ( AT5G06060.1 )
(BLAST)
001: METDKRWSLA GKTALVTGGT RGIGRAVVEE LAKFGAKVHT CSRNQEELNA CLNDWKANGL VVSGSVCDAS VRDQREKLIQ EASSAFSGKL NILINNVGTN
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP
Arabidopsis Description
Tropinone reductase homolog At5g06060 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHT0]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.