Factsheet for Os03t0269100-02

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G094500.1	Wheat	cytosol, peroxisome, plastid	70.78	80.44
TraesCS4B01G209900.1	Wheat	peroxisome	70.45	80.37
Os03t0268900-02	Rice	plastid	66.23	75.56
Os03t0269000-01	Rice	plastid	50.97	73.71
GSMUA_Achr10P...	Banana	cytosol	62.66	71.22
TraesCS4D01G210700.1	Wheat	plastid	71.1	69.09
VIT_13s0019g02180.t01	Wine grape	peroxisome, plasma membrane, plastid	59.09	67.91
HORVU4Hr1G060330.1	Barley	mitochondrion	70.13	67.5
CDY14094	Canola	peroxisome	56.82	66.54
CDY04977	Canola	peroxisome	56.82	66.54
Solyc03g096640.2.1	Tomato	mitochondrion, plastid	57.79	66.42
PGSC0003DMT400043159	Potato	mitochondrion	57.47	65.8
Bra028744.1-P	Field mustard	cytosol	56.17	65.78
AT5G06060.1	Thale cress	peroxisome	55.84	65.15
CDX98899	Canola	peroxisome	54.87	64.5
CDY04975	Canola	mitochondrion	23.05	63.39
EES08074	Sorghum	plastid	61.36	62.79
VIT_13s0019g02130.t01	Wine grape	peroxisome	53.9	61.94
CDX70101	Canola	peroxisome	52.6	61.83
VIT_13s0019g02140.t01	Wine grape	peroxisome	54.22	61.62
Bra009159.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	52.27	61.45
KRG97856	Soybean	mitochondrion, plastid	53.25	60.29
KRH31007	Soybean	mitochondrion	52.6	59.78
KRH31025	Soybean	plastid	53.57	59.57
KRH31026	Soybean	cytosol, mitochondrion, peroxisome, plastid	51.95	58.82
KRG97870	Soybean	mitochondrion	46.1	56.8
Solyc03g096660.1.1	Tomato	extracellular	35.39	55.9
PGSC0003DMT400043152	Potato	peroxisome	50.0	55.6
KRG97857	Soybean	mitochondrion	44.81	55.2
Os11t0652900-00	Rice	cytosol	37.34	54.5
Os11t0443700-01	Rice	plastid	45.45	53.85
VIT_13s0019g02170.t01	Wine grape	mitochondrion, nucleus, peroxisome, plastid	49.68	53.68
Os11t0654400-00	Rice	mitochondrion	45.78	52.81
KRH31021	Soybean	mitochondrion	51.3	52.15
Os01t0930900-00	Rice	mitochondrion	47.08	51.6
Os11t0438700-02	Rice	plastid	42.21	49.24
CDX98898	Canola	cytosol, peroxisome, plasma membrane	48.05	47.74
Os01t0931000-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	23.05	46.71
Os11t0438000-02	Rice	cytosol	18.51	42.22
Os04t0269100-00	Rice	plastid	28.57	34.65
Os09t0133200-01	Rice	peroxisome	27.6	33.6
Os04t0614000-01	Rice	cytosol	23.05	23.75
Os05t0140800-01	Rice	plastid	23.38	19.73

Protein Annotations

EntrezGene:4332377	MapMan:50.1.1	ProteinID:AAP06907.1	ProteinID:AAP06918.1	ProteinID:ABF95191.1	ProteinID:BAS83455.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os03g0269100	EnsemblPlants:Os03t0269100-02	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081
ScanProsite:PS00061	PANTHER:PTHR42898	PANTHER:PTHR42898:SF14	UniProt:Q84JJ3	InterPro:SDR_fam	SUPFAM:SSF51735
InterPro:Sc_DH/Rdtase_CS	UniParc:UPI000018DC23	RefSeq:XP_015628099.1	SEG:seg	:	:

Description

Senescence-associated Gene13Short chain alcohol dehydrogenase-like. (Os03t0269100-01);Similar to tropinone reductase. (Os03t0269100-02)

Coordinates

chr3:-:8950039..8952082

Molecular Weight (calculated)

33415.8 Da

IEP (calculated)

7.498

GRAVY (calculated)

-0.155

Length

308 amino acids

Sequence
(BLAST)

001: MAEAVASGAA GRWTLRGKTA LVTGGTRGIG YSPQHPSLVL PYRYPVRSET STAEPLLLFH DQRGEFMRRH AVVDELAALG AAVHTCSRKE AELGERLREW
101: EGKGFRVTGS VCDVSVREQR ERMLREVAGL YGGKLDILVN NVGTNFSKQT TEYSADDYSF IMATNLESAY HLCQLAHPLL KSSGSGSVVF ISSVSGVVAV
201: SSGSVYAMTK GAMNQLAKNL ACEWAKDNIR TNSVAPWYMK TSLVEDELAR KDFADSVVRR TALKRVGEPE EVSSLVAFLC MPGASYITGQ TISVDGGMTI
301: NGLYPTQD

Best Arabidopsis Sequence Match ( AT5G06060.1 )
(BLAST)

001: METDKRWSLA GKTALVTGGT RGIGRAVVEE LAKFGAKVHT CSRNQEELNA CLNDWKANGL VVSGSVCDAS VRDQREKLIQ EASSAFSGKL NILINNVGTN
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP

Arabidopsis Description

Tropinone reductase homolog At5g06060 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHT0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.