Factsheet for Os09t0133200-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 4
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	peroxisome
MultiLoc:	peroxisome
Plant-mPloc:	plastid
PProwler:	peroxisome
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G012410.1	Barley	peroxisome	89.72	89.72
TraesCS5A01G164400.1	Wheat	peroxisome	88.54	88.54
TraesCS5D01G169300.1	Wheat	peroxisome	88.54	88.54
TraesCS5B01G161900.1	Wheat	peroxisome	87.35	87.35
EER98384	Sorghum	peroxisome	84.98	84.98
EES19901	Sorghum	peroxisome	83.79	83.79
Zm00001d019439_P001	Maize	extracellular	83.0	83.0
KRH02005	Soybean	endoplasmic reticulum, nucleus	73.91	74.21
Zm00001d038897_P001	Maize	peroxisome	81.42	73.84
Solyc04g014670.2.1	Tomato	plastid	66.8	66.8
GSMUA_Achr3P01040_001	Banana	cytosol	25.3	66.67
KRH36525	Soybean	endoplasmic reticulum	66.8	66.27
PGSC0003DMT400034518	Potato	peroxisome	66.4	66.14
AT4G05530.1	Thale cress	peroxisome	66.4	66.14
KRH11511	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	66.4	65.88
CDX94534	Canola	peroxisome	66.4	65.88
CDY16690	Canola	peroxisome	66.01	65.49
Bra029476.1-P	Field mustard	peroxisome	66.01	65.49
CDY35231	Canola	peroxisome	32.02	65.32
HORVU5Hr1G049670.1	Barley	peroxisome	64.43	64.43
CDY27447	Canola	cytosol, mitochondrion, peroxisome	64.03	62.79
CDX76382	Canola	cytosol, mitochondrion, peroxisome	63.24	62.26
GSMUA_Achr3P01030_001	Banana	mitochondrion	54.15	61.99
Bra020854.1-P	Field mustard	cytosol, mitochondrion, peroxisome	62.85	61.87
KRH70902	Soybean	cytosol	24.51	56.36
Os03t0269000-01	Rice	plastid	26.48	31.46
Os03t0268900-02	Rice	plastid	33.2	31.11
Os01t0931000-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	18.58	30.92
Os11t0652900-00	Rice	cytosol	25.69	30.81
Os11t0654400-00	Rice	mitochondrion	32.41	30.71
Os11t0443700-01	Rice	plastid	30.43	29.62
Os11t0438700-02	Rice	plastid	30.83	29.55
Os01t0930900-00	Rice	mitochondrion	32.41	29.18
Os03t0269100-02	Rice	mitochondrion, plastid	33.6	27.6
Os11t0438000-02	Rice	cytosol	13.44	25.19
Os04t0614000-01	Rice	cytosol	29.64	25.08
Os05t0140800-01	Rice	plastid	27.27	18.9
Os04t0269100-00	Rice	plastid	18.18	18.11
VIT_00s0516g00030.t01	Wine grape	cytosol, peroxisome	65.22	16.04

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	EntrezGene:4346459	EMBL:AK073545	EMBL:AK109426	ProteinID:BAD22302.1
ProteinID:BAD34142.1	ProteinID:BAF24544.1	ProteinID:BAT06958.1	ProteinID:EEE69225.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009653	GO:GO:0009719	GO:GO:0009987	GO:GO:0016049
GO:GO:0016491	GO:GO:0030154	GO:GO:0040007	GO:GO:0048767	GO:GO:0055114	GO:GO:0080024
GO:GO:0080026	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os09g0133200	EnsemblPlants:Os09t0133200-01	PFAM:PF13561	PRINTS:PR00080
PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR43943	PANTHER:PTHR43943:SF2	UniProt:Q6K447	InterPro:SDR_fam
SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	UniParc:UPI0000377E24	RefSeq:XP_015651170.1	SEG:seg	:

Description

Similar to Dehydrogenase/reductase SDR family member 4 (EC 1.1.1.184) (NADPH- dependent carbonyl reductase/NADP-retinol dehydrogenase) (CR) (PHCR) (Peroxisomal short-chain alcohol dehydrogenase) (NADPH-dependent retinol dehydrogenase/reductase) (NDRD) (SCAD-SRL) (humNRDR) (PSCD). Splice isoform 2. (Os09t0133200-01);Similar to Dehydrogenase/reductase SDR family member 4 (EC 1.1.1.184) (NADPH- dependent carbonyl reductase/NADP-retinol dehydrogenase) (CR) (PHCR) (Peroxisomal short-chain alcohol dehydrogenase) (NADPH-dependent retinol dehydrogenase/reductase) (NDRD) (SCAD-SRL) (humNRDR) (PSCD). Splice isoform 2. (Os09t0133200-02)

Coordinates

chr9:-:2512448..2517177

Molecular Weight (calculated)

26801.8 Da

IEP (calculated)

9.190

GRAVY (calculated)

0.264

Length

253 amino acids

Sequence
(BLAST)

001: MEVKCRRLEG KVAVVTASTQ GIGLAIAERL GLEGAAVVIS SRKKKNVDEA VVGLRAKGIT VVGVVCHVSI PEQRKNLIDT AVKNFGHIDI VVSNAAANPS
101: VDNILEMKEP ILDKLWDINV KASILLLQDA AAYLRKGSSV ILISSITGYN PEPALSMYAV TKTALLGLTK ALAAEMGPNT RVNCIAPGFV PTNFARFLTT
201: NDTIKNELID RSTLKRLGTV EDMAAAAAFL ASDDASFITA ETIVVAGGTR SRL

Best Arabidopsis Sequence Match ( AT4G05530.1 )
(BLAST)

001: MEKKLPRRLE GKVAIVTAST QGIGFGITER FGLEGASVVV SSRKQANVDE AVAKLKSKGI DAYGIVCHVS NAQHRRNLVE KTVQKYGKID IVVCNAAANP
101: STDPILSSKE AVLDKLWEIN VKSSILLLQD MAPHLEKGSS VIFITSIAGF SPQGAMAMYG VTKTALLGLT KALAAEMAPD TRVNAVAPGF VPTHFASFIT
201: GSSEVREGIE EKTLLNRLGT TGDMAAAAAF LASDDSSYIT GETLVVAGGM PSRL

Arabidopsis Description

SDRAShort-chain dehydrogenase/reductase SDRA [Source:UniProtKB/Swiss-Prot;Acc:Q9S9W2]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.