Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G164400.1 | Wheat | peroxisome | 99.21 | 99.21 |
| TraesCS5B01G161900.1 | Wheat | peroxisome | 98.81 | 98.81 |
| HORVU0Hr1G012410.1 | Barley | peroxisome | 97.23 | 97.23 |
| EER98384 | Sorghum | peroxisome | 89.72 | 89.72 |
| Zm00001d019439_P001 | Maize | extracellular | 88.93 | 88.93 |
| EES19901 | Sorghum | peroxisome | 88.93 | 88.93 |
| Os09t0133200-01 | Rice | peroxisome | 88.54 | 88.54 |
| Zm00001d038897_P001 | Maize | peroxisome | 86.56 | 78.49 |
| KRH02005 | Soybean | endoplasmic reticulum, nucleus | 73.12 | 73.41 |
| CDX94534 | Canola | peroxisome | 68.77 | 68.24 |
| AT4G05530.1 | Thale cress | peroxisome | 68.38 | 68.11 |
| Solyc04g014670.2.1 | Tomato | plastid | 67.98 | 67.98 |
| CDY16690 | Canola | peroxisome | 68.38 | 67.84 |
| Bra029476.1-P | Field mustard | peroxisome | 68.38 | 67.84 |
| CDY35231 | Canola | peroxisome | 32.81 | 66.94 |
| PGSC0003DMT400034518 | Potato | peroxisome | 67.19 | 66.93 |
| GSMUA_Achr3P01040_001 | Banana | cytosol | 25.3 | 66.67 |
| KRH36525 | Soybean | endoplasmic reticulum | 66.01 | 65.49 |
| CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 66.4 | 65.12 |
| KRH11511 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 65.61 | 65.1 |
| CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 66.01 | 64.98 |
| Bra020854.1-P | Field mustard | cytosol, mitochondrion, peroxisome | 65.61 | 64.59 |
| GSMUA_Achr3P01030_001 | Banana | mitochondrion | 54.55 | 62.44 |
| KRH70902 | Soybean | cytosol | 24.9 | 57.27 |
| TraesCS5D01G545800.1 | Wheat | cytosol, mitochondrion, plastid | 36.76 | 35.23 |
| TraesCS5D01G316400.1 | Wheat | cytosol, peroxisome, plastid | 35.97 | 34.87 |
| TraesCS5D01G530100.1 | Wheat | peroxisome | 35.57 | 34.62 |
| TraesCS4D01G309300.1 | Wheat | cytosol, peroxisome, plastid | 35.18 | 33.84 |
| TraesCS2D01G497300.1 | Wheat | cytosol, peroxisome, plastid | 35.18 | 33.84 |
| TraesCS3D01G396800.1 | Wheat | extracellular, mitochondrion, plastid | 33.99 | 32.7 |
| TraesCS5D01G545700.1 | Wheat | peroxisome | 33.99 | 32.7 |
| TraesCS3D01G396900.1 | Wheat | mitochondrion, plastid | 33.6 | 32.32 |
| TraesCS1D01G391900.1 | Wheat | mitochondrion | 11.86 | 32.26 |
| TraesCS1D01G398800.1 | Wheat | mitochondrion | 33.2 | 32.18 |
| TraesCS4D01G134700.1 | Wheat | peroxisome | 34.78 | 31.88 |
| TraesCS4D01G210800.1 | Wheat | plastid | 33.6 | 31.25 |
| TraesCS1D01G398900.1 | Wheat | peroxisome | 21.74 | 30.73 |
| TraesCS5D01G037500.1 | Wheat | plastid | 31.23 | 30.04 |
| TraesCS2D01G366000.2 | Wheat | peroxisome | 34.78 | 28.95 |
| TraesCS3D01G440700.1 | Wheat | peroxisome | 31.23 | 28.73 |
| TraesCS4D01G210700.1 | Wheat | plastid | 33.6 | 26.81 |
| TraesCS2D01G418900.1 | Wheat | peroxisome | 28.85 | 24.41 |
| TraesCS1D01G084900.1 | Wheat | mitochondrion, plastid | 30.04 | 21.9 |
| VIT_00s0516g00030.t01 | Wine grape | cytosol, peroxisome | 64.43 | 15.84 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009987 | GO:GO:0016049 | GO:GO:0016491 | GO:GO:0030154 |
| GO:GO:0040007 | GO:GO:0048767 | GO:GO:0080024 | GO:GO:0080026 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF13561 |
| PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR43943 | PANTHER:PTHR43943:SF2 | InterPro:SDR_fam |
| SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | EnsemblPlantsGene:TraesCS5D01G169300 | EnsemblPlants:TraesCS5D01G169300.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr5D:-:265548630..265558317
Molecular Weight (calculated)
26701.4 Da
IEP (calculated)
8.080
GRAVY (calculated)
0.224
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVKCRRLEG KVAVVTASTQ GIGLAIAERL GLEGAAVVIS SRKQKNVDEA VEGLRAKGIT VVGAVCHVSN AEQRKHLVDT AVKNFGHIDI VVSNAAANPS
101: VDSILEMKES VLDKLWDINV KASILLLQDA APHLRKGSSV ILISSIAGYN PDAALTMYGV TKTALFGLTK ALATEMGPNT RVNCIAPGFV PTRFAGFLTT
201: NETIRNELIE RSILKRLGSV EDMASAAAFL ASDDASFITA ETIVVAGGTQ SRL
101: VDSILEMKES VLDKLWDINV KASILLLQDA APHLRKGSSV ILISSIAGYN PDAALTMYGV TKTALFGLTK ALATEMGPNT RVNCIAPGFV PTRFAGFLTT
201: NETIRNELIE RSILKRLGSV EDMASAAAFL ASDDASFITA ETIVVAGGTQ SRL
001: MEKKLPRRLE GKVAIVTAST QGIGFGITER FGLEGASVVV SSRKQANVDE AVAKLKSKGI DAYGIVCHVS NAQHRRNLVE KTVQKYGKID IVVCNAAANP
101: STDPILSSKE AVLDKLWEIN VKSSILLLQD MAPHLEKGSS VIFITSIAGF SPQGAMAMYG VTKTALLGLT KALAAEMAPD TRVNAVAPGF VPTHFASFIT
201: GSSEVREGIE EKTLLNRLGT TGDMAAAAAF LASDDSSYIT GETLVVAGGM PSRL
101: STDPILSSKE AVLDKLWEIN VKSSILLLQD MAPHLEKGSS VIFITSIAGF SPQGAMAMYG VTKTALLGLT KALAAEMAPD TRVNAVAPGF VPTHFASFIT
201: GSSEVREGIE EKTLLNRLGT TGDMAAAAAF LASDDSSYIT GETLVVAGGM PSRL
Arabidopsis Description
SDRAShort-chain dehydrogenase/reductase SDRA [Source:UniProtKB/Swiss-Prot;Acc:Q9S9W2]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.