Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G342900.1 | Wheat | cytosol, peroxisome, plastid | 63.44 | 59.0 |
| TraesCS1D01G398900.1 | Wheat | peroxisome | 61.29 | 31.84 |
| TraesCS3D01G396800.1 | Wheat | extracellular, mitochondrion, plastid | 89.25 | 31.56 |
| TraesCS3D01G396900.1 | Wheat | mitochondrion, plastid | 81.72 | 28.9 |
| CDY35991 | Canola | plastid | 37.63 | 28.23 |
| TraesCS5D01G037500.1 | Wheat | plastid | 70.97 | 25.1 |
| TraesCS5D01G316400.1 | Wheat | cytosol, peroxisome, plastid | 64.52 | 22.99 |
| TraesCS5D01G530100.1 | Wheat | peroxisome | 61.29 | 21.92 |
| TraesCS2D01G497300.1 | Wheat | cytosol, peroxisome, plastid | 60.22 | 21.29 |
| TraesCS5D01G545700.1 | Wheat | peroxisome | 59.14 | 20.91 |
| TraesCS4D01G309300.1 | Wheat | cytosol, peroxisome, plastid | 59.14 | 20.91 |
| TraesCS5D01G545800.1 | Wheat | cytosol, mitochondrion, plastid | 59.14 | 20.83 |
| TraesCS1D01G398800.1 | Wheat | mitochondrion | 58.06 | 20.69 |
| TraesCS4D01G134700.1 | Wheat | peroxisome | 58.06 | 19.57 |
| GSMUA_Achr9P03470_001 | Banana | cytosol | 55.91 | 19.33 |
| TraesCS3D01G440700.1 | Wheat | peroxisome | 56.99 | 19.27 |
| Os11t0438700-02 | Rice | plastid | 52.69 | 18.56 |
| TraesCS2D01G366000.2 | Wheat | peroxisome | 60.22 | 18.42 |
| Os11t0443700-01 | Rice | plastid | 49.46 | 17.69 |
| GSMUA_Achr9P03430_001 | Banana | cytosol, mitochondrion, plastid | 49.46 | 17.56 |
| GSMUA_Achr9P03440_001 | Banana | cytosol | 50.54 | 17.34 |
| TraesCS4D01G210800.1 | Wheat | plastid | 50.54 | 17.28 |
| GSMUA_Achr9P03420_001 | Banana | mitochondrion | 55.91 | 17.28 |
| Bra029705.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 30.11 | 17.18 |
| GSMUA_Achr11P... | Banana | cytosol | 49.46 | 17.16 |
| TraesCS4D01G210700.1 | Wheat | plastid | 52.69 | 15.46 |
| GSMUA_Achr5P04560_001 | Banana | cytosol | 53.76 | 14.49 |
| GSMUA_Achr6P34030_001 | Banana | cytosol | 47.31 | 12.15 |
| TraesCS5D01G169300.1 | Wheat | peroxisome | 32.26 | 11.86 |
| GSMUA_Achr9P03450_001 | Banana | cytosol, nucleus, peroxisome | 54.84 | 10.83 |
| TraesCS1D01G084900.1 | Wheat | mitochondrion, plastid | 36.56 | 9.8 |
| TraesCS2D01G418900.1 | Wheat | peroxisome | 31.18 | 9.7 |
| GSMUA_Achr10P... | Banana | cytosol | 49.46 | 8.53 |
| Os04t0269100-00 | Rice | plastid | 4.3 | 1.57 |
| Os11t0438000-02 | Rice | cytosol | 1.08 | 0.74 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G391900.1 | EnsemblPlantsGene:TraesCS1D01G391900 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR42898 |
| PANTHER:PTHR42898:SF1 | PFAM:PF13561 | PRINTS:PR00081 | SUPFAM:SSF51735 | TMHMM:TMhelix | MapMan:35.1 |
Description
No Description!
Coordinates
chr1D:+:462300718..462301781
Molecular Weight (calculated)
9953.1 Da
IEP (calculated)
8.218
GRAVY (calculated)
0.142
Length
93 amino acids
Sequence
(BLAST)
(BLAST)
1: MAKGGINQLT RSLATEWAQN KIRVNCVAPS ATKTDMLNSL YLEIIENELA RTPMRRAGEP AEVAIVVSFL CMPAASFVTG QVITVDGGRT ISG
001: METDKRWSLA GKTALVTGGT RGIGRAVVEE LAKFGAKVHT CSRNQEELNA CLNDWKANGL VVSGSVCDAS VRDQREKLIQ EASSAFSGKL NILINNVGTN
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP
Arabidopsis Description
Tropinone reductase homolog At5g06060 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHT0]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.