Factsheet for Os04t0269100-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
plastid 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0438000-02	Rice	cytosol	27.17	51.11
Os11t0443700-01	Rice	plastid	48.43	47.31
Os11t0652900-00	Rice	cytosol	36.61	44.08
Os11t0438700-02	Rice	plastid	44.88	43.18
Os03t0269000-01	Rice	plastid	34.65	41.31
GSMUA_Achr11P...	Banana	cytosol	38.98	36.94
Os11t0654400-00	Rice	mitochondrion	37.8	35.96
GSMUA_Achr9P03470_001	Banana	cytosol	37.8	35.69
GSMUA_Achr9P03430_001	Banana	cytosol, mitochondrion, plastid	35.43	34.35
GSMUA_Achr9P03440_001	Banana	cytosol	36.61	34.32
Os03t0268900-02	Rice	plastid	36.22	34.07
Os01t0930900-00	Rice	mitochondrion	37.01	33.45
GSMUA_Achr9P03420_001	Banana	mitochondrion	36.22	30.56
Os03t0269100-02	Rice	mitochondrion, plastid	34.65	28.57
GSMUA_Achr5P04560_001	Banana	cytosol	38.19	28.12
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	15.75	24.54
GSMUA_Achr6P34030_001	Banana	cytosol	34.65	24.31
GSMUA_Achr9P03450_001	Banana	cytosol, nucleus, peroxisome	38.19	20.59
Os09t0133200-01	Rice	peroxisome	18.11	18.18
Os01t0931000-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	10.24	17.11
GSMUA_Achr10P...	Banana	cytosol	36.22	17.07
Os04t0614000-01	Rice	cytosol	18.11	15.38
CDY35991	Canola	plastid	6.3	12.9
Os05t0140800-01	Rice	plastid	17.32	12.05
TraesCS1D01G391900.1	Wheat	mitochondrion	1.57	4.3
TraesCS4A01G342900.1	Wheat	cytosol, peroxisome, plastid	0.79	2.0

Protein Annotations

EnsemblPlants:Os04t0269100-00	EnsemblPlantsGene:Os04g0269100	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR42898
PANTHER:PTHR42898:SF7	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	ProteinID:BAS88313.1	SUPFAM:SSF51735
UniParc:UPI000393B07D	UniProt:A0A0N7KIR0	MapMan:50.1.1	:	:	:

Description

Similar to OSIGBa0135A16.7 protein. (Os04t0269100-00)

Coordinates

chr4:+:11180119..11183765

Molecular Weight (calculated)

27324.8 Da

IEP (calculated)

8.917

GRAVY (calculated)

-0.094

Length

254 amino acids

Sequence
(BLAST)

001: MTRRDRDDEK RHEVDTRKGA WQAVAGLAGL RLNKHPKYCA DIWRQTLYAH TSSTQVLHSI VSLTHQPQEM MASSSSAQET GRWSLAGATA LVTGGSKGIG
101: RAIVEELASF GATVHTCARN EATLNSCLEE WSAKKLSITS SVCDVSARAD REALAGRVTA MFDGKLDILV NNVGFLFLKP AVNVTPEELS RVMAGNLESC
201: FHLSQLMHPL LKTSGKGNVV NISGISTVTG FPSLPICAFC AAKGAMNQIK LPRA

Best Arabidopsis Sequence Match ( AT2G29350.1 )
(BLAST)

001: MAKEGGLGEN SRWSLGGMTA LVTGGSKGIG EAVVEELAML GAKVHTCARD ETQLQERLRE WQAKGFQVTT SVCDVSSRDQ RVKLMETVSS LYQGKLNILV
101: NNVGTSIFKP TTEYTAEDFS FVMATNLESA FHLSQLAHPL LKASGSGSIV LISSAAGVVH VNVGSIYGAT KGAMNQLARN LACEWASDNI RTNSVCPWYI
201: TTPLSNDFFD EEFKKEAVRT TPMGRVGEAN EVSPLVAFLC LPSASYITGQ TICVDGGATV NGFSFKTMP

Arabidopsis Description

SAG13SAG13 [Source:UniProtKB/TrEMBL;Acc:A0A178VTS8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.