Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0438700-02 | Rice | plastid | 60.0 | 30.68 |
| Os11t0652900-00 | Rice | cytosol | 45.93 | 29.38 |
| Os11t0443700-01 | Rice | plastid | 56.3 | 29.23 |
| Os03t0269000-01 | Rice | plastid | 45.19 | 28.64 |
| Os04t0269100-00 | Rice | plastid | 51.11 | 27.17 |
| Os11t0654400-00 | Rice | mitochondrion | 46.67 | 23.6 |
| GSMUA_Achr11P... | Banana | cytosol | 45.19 | 22.76 |
| GSMUA_Achr9P03440_001 | Banana | cytosol | 45.19 | 22.51 |
| Os01t0930900-00 | Rice | mitochondrion | 46.67 | 22.42 |
| GSMUA_Achr9P03470_001 | Banana | cytosol | 43.7 | 21.93 |
| GSMUA_Achr9P03430_001 | Banana | cytosol, mitochondrion, plastid | 42.22 | 21.76 |
| Bra029705.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 25.19 | 20.86 |
| Os03t0268900-02 | Rice | plastid | 41.48 | 20.74 |
| GSMUA_Achr9P03420_001 | Banana | mitochondrion | 45.19 | 20.27 |
| Os03t0269100-02 | Rice | mitochondrion, plastid | 42.22 | 18.51 |
| GSMUA_Achr5P04560_001 | Banana | cytosol | 45.93 | 17.97 |
| GSMUA_Achr6P34030_001 | Banana | cytosol | 41.48 | 15.47 |
| Os09t0133200-01 | Rice | peroxisome | 25.19 | 13.44 |
| GSMUA_Achr9P03450_001 | Banana | cytosol, nucleus, peroxisome | 42.22 | 12.1 |
| GSMUA_Achr10P... | Banana | cytosol | 44.44 | 11.13 |
| Os04t0614000-01 | Rice | cytosol | 22.96 | 10.37 |
| Os05t0140800-01 | Rice | plastid | 15.56 | 5.75 |
| Os01t0931000-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 4.44 | 3.95 |
| CDY35991 | Canola | plastid | 2.96 | 3.23 |
| TraesCS1D01G391900.1 | Wheat | mitochondrion | 0.74 | 1.08 |
| TraesCS4A01G342900.1 | Wheat | cytosol, peroxisome, plastid | 0.74 | 1.0 |
Protein Annotations
| EnsemblPlants:Os11t0438000-02 | EnsemblPlantsGene:Os11g0438000 | Gene3D:3.40.50.720 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR42898 | PANTHER:PTHR42898:SF1 | PFAM:PF00106 | ProteinID:BAF28170.1 |
| ProteinID:BAT13857.1 | SUPFAM:SSF51735 | UniParc:UPI0000DD9C10 | UniProt:Q0ISZ5 | MapMan:35.1 | : |
Description
Hypothetical conserved gene. (Os11t0438000-01);Similar to Short chain alcohol dehydrogenase-like. (Os11t0438000-02)
Coordinates
chr11:+:14299846..14303669
Molecular Weight (calculated)
14600.6 Da
IEP (calculated)
8.140
GRAVY (calculated)
-0.045
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MQNQCERNMA SSGAGRDERW ILAGATALVT GRSKGIGRAI VEELVGFGST VHTCARSEAE LSRCQEELTA KGLAVSFSVC DVSVRTDREE LVSRVRELFG
101: GKLNILVSLI ISCHHDFQRS NGICKIRGAV HIAPT
101: GKLNILVSLI ISCHHDFQRS NGICKIRGAV HIAPT
001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGL YTNY
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGL YTNY
Arabidopsis Description
Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.