Factsheet for Os11t0443700-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0438700-02	Rice	plastid	73.46	72.35
Os11t0438000-02	Rice	cytosol	29.23	56.3
Os03t0268900-02	Rice	plastid	57.31	55.19
Os11t0652900-00	Rice	cytosol	44.62	54.98
Os11t0654400-00	Rice	mitochondrion	56.15	54.68
GSMUA_Achr11P...	Banana	cytosol	56.15	54.48
GSMUA_Achr9P03470_001	Banana	cytosol	56.15	54.28
Os03t0269000-01	Rice	plastid	43.85	53.52
GSMUA_Achr9P03430_001	Banana	cytosol, mitochondrion, plastid	53.08	52.67
GSMUA_Achr9P03440_001	Banana	cytosol	54.62	52.4
Os01t0930900-00	Rice	mitochondrion	56.54	52.31
TraesCS4A01G342900.1	Wheat	cytosol, peroxisome, plastid	19.62	51.0
TraesCS1D01G391900.1	Wheat	mitochondrion	17.69	49.46
Os01t0931000-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	28.85	49.34
Os04t0269100-00	Rice	plastid	47.31	48.43
GSMUA_Achr9P03420_001	Banana	mitochondrion	53.85	46.51
Os03t0269100-02	Rice	mitochondrion, plastid	53.85	45.45
CDY35991	Canola	plastid	21.54	45.16
GSMUA_Achr5P04560_001	Banana	cytosol	56.15	42.32
GSMUA_Achr6P34030_001	Banana	cytosol	52.69	37.85
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	23.08	36.81
GSMUA_Achr9P03450_001	Banana	cytosol, nucleus, peroxisome	55.77	30.79
Os09t0133200-01	Rice	peroxisome	29.62	30.43
GSMUA_Achr10P...	Banana	cytosol	56.92	27.46
Os04t0614000-01	Rice	cytosol	31.15	27.09
Os05t0140800-01	Rice	plastid	29.62	21.1

Protein Annotations

Gene3D:3.40.50.720	EntrezGene:4350428	MapMan:50.1.1	ProteinID:AAX96276.1	ProteinID:ABA93379.1	EMBL:AK108232
ProteinID:BAF28182.1	ProteinID:BAT13875.1	ProteinID:EAZ29664.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os11g0443700	EnsemblPlants:Os11t0443700-01
PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR42898	PANTHER:PTHR42898:SF7
UniProt:Q53KZ3	InterPro:SDR_fam	SMART:SM00822	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	UniParc:UPI00005095EC
RefSeq:XP_015615732.1	:	:	:	:	:

Description

Similar to Short chain alcohol dehydrogenase-like. (Os11t0443700-01)

Coordinates

chr11:+:14660801..14663959

Molecular Weight (calculated)

27447.0 Da

IEP (calculated)

7.733

GRAVY (calculated)

0.236

Length

260 amino acids

Sequence
(BLAST)

001: MATASSINKR FSLAGATALV TGGSKGIGRA IVEELASFGA TVHTCARNQA ELSRCQEEWT AKGLAVTVSV CDVAVRADRE ALAGRVSAMF DGKLSILVNN
101: AGTAYLKPAA DLTPEETSRL MTTNFESCFH LSQLFYPLLK DSGRGSIVNI SSVASVLAFH SLPIYSAAKG AMNQVTRNLA CEWASDGIRV NSVAPGYIQT
201: PLLTAFVAGN DFAQVEFNRL PLGRLGKPED ISSLVAFLCM PAASYITGQI ICVDGGRMLS

Best Arabidopsis Sequence Match ( AT5G06060.1 )
(BLAST)

001: METDKRWSLA GKTALVTGGT RGIGRAVVEE LAKFGAKVHT CSRNQEELNA CLNDWKANGL VVSGSVCDAS VRDQREKLIQ EASSAFSGKL NILINNVGTN
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP

Arabidopsis Description

Tropinone reductase homolog At5g06060 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHT0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.