Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 2
- mitochondrion 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr11P... | Banana | cytosol | 34.51 | 69.4 |
GSMUA_Achr9P03430_001 | Banana | cytosol, mitochondrion, plastid | 32.65 | 67.18 |
GSMUA_Achr9P03440_001 | Banana | cytosol | 33.02 | 65.68 |
GSMUA_Achr9P03470_001 | Banana | cytosol | 32.65 | 65.43 |
TraesCS3B01G434900.1 | Wheat | cytosol, mitochondrion, plastid | 9.83 | 60.23 |
GSMUA_Achr9P03420_001 | Banana | mitochondrion | 32.1 | 57.48 |
Os11t0443700-01 | Rice | plastid | 27.46 | 56.92 |
GSMUA_Achr10P... | Banana | cytosol | 28.39 | 56.46 |
GSMUA_Achr5P04570_001 | Banana | cytosol | 13.17 | 55.91 |
Zm00001d048723_P001 | Maize | mitochondrion | 27.09 | 55.3 |
EES10199 | Sorghum | mitochondrion | 27.27 | 55.26 |
TraesCS1B01G419000.1 | Wheat | mitochondrion, plastid | 18.55 | 54.95 |
TraesCS5B01G310100.1 | Wheat | peroxisome | 26.53 | 54.79 |
Os11t0438700-02 | Rice | plastid | 26.72 | 54.55 |
TraesCS5D01G316400.1 | Wheat | cytosol, peroxisome, plastid | 26.35 | 54.41 |
TraesCS2A01G497100.1 | Wheat | golgi, peroxisome, plastid | 26.53 | 54.37 |
TraesCS5D01G545800.1 | Wheat | cytosol, mitochondrion, plastid | 26.53 | 54.17 |
TraesCS1A01G390900.1 | Wheat | mitochondrion, plastid | 25.97 | 54.05 |
TraesCS2D01G497300.1 | Wheat | cytosol, peroxisome, plastid | 26.35 | 53.99 |
TraesCS1A01G383700.1 | Wheat | cytosol, extracellular, plastid | 15.21 | 53.95 |
TraesCS1B01G418900.1 | Wheat | mitochondrion | 25.97 | 53.64 |
TraesCS1D01G398800.1 | Wheat | mitochondrion | 25.79 | 53.26 |
TraesCS5D01G545700.1 | Wheat | peroxisome | 25.97 | 53.23 |
EES10198 | Sorghum | mitochondrion, plastid | 26.72 | 53.14 |
TraesCS5B01G542200.1 | Wheat | cytosol, peroxisome, plastid | 25.79 | 52.85 |
TraesCS4D01G309300.1 | Wheat | cytosol, peroxisome, plastid | 25.79 | 52.85 |
Zm00001d007687_P001 | Maize | extracellular | 25.79 | 52.85 |
TraesCS2A01G369400.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 26.16 | 52.81 |
TraesCS5D01G530100.1 | Wheat | peroxisome | 25.42 | 52.69 |
EES10195 | Sorghum | mitochondrion | 25.79 | 52.65 |
HORVU1Hr1G086200.3 | Barley | peroxisome, plastid | 26.16 | 52.61 |
KXG29040 | Sorghum | cytosol, peroxisome, plastid | 23.56 | 52.48 |
TraesCS3A01G401900.1 | Wheat | extracellular, mitochondrion, plastid | 25.6 | 52.47 |
KXG29038 | Sorghum | mitochondrion, plastid | 25.6 | 52.27 |
TraesCS2B01G525400.1 | Wheat | endoplasmic reticulum, peroxisome, plastid | 26.16 | 52.22 |
TraesCS3D01G396800.1 | Wheat | extracellular, mitochondrion, plastid | 25.42 | 52.09 |
TraesCS5B01G531600.1 | Wheat | mitochondrion | 25.05 | 51.92 |
TraesCS5B01G531800.1 | Wheat | cytosol, peroxisome, plastid | 24.49 | 51.76 |
TraesCS4A01G328000.1 | Wheat | cytosol, peroxisome, plastid | 25.23 | 51.71 |
TraesCS3D01G396900.1 | Wheat | mitochondrion, plastid | 25.23 | 51.71 |
TraesCS5B01G028300.1 | Wheat | plastid | 25.23 | 51.71 |
HORVU1Hr1G086190.1 | Barley | peroxisome | 18.37 | 51.03 |
TraesCS3A01G402000.1 | Wheat | mitochondrion, plastid | 24.86 | 50.95 |
GSMUA_Achr5P04560_001 | Banana | cytosol | 32.47 | 50.72 |
Os11t0652900-00 | Rice | cytosol | 19.85 | 50.71 |
TraesCS1D01G398900.1 | Wheat | peroxisome | 16.7 | 50.28 |
TraesCS5A01G029700.1 | Wheat | plastid | 24.49 | 50.19 |
TraesCS5D01G037500.1 | Wheat | plastid | 24.49 | 50.19 |
Os11t0654400-00 | Rice | mitochondrion | 24.68 | 49.81 |
HORVU1Hr1G084560.2 | Barley | extracellular, mitochondrion, plastid | 24.3 | 49.81 |
HORVU0Hr1G027400.1 | Barley | peroxisome | 18.55 | 49.75 |
TraesCS1D01G391900.1 | Wheat | mitochondrion | 8.53 | 49.46 |
KXG34055 | Sorghum | plastid | 25.42 | 49.46 |
TraesCS1A01G390800.1 | Wheat | mitochondrion, plastid | 25.6 | 49.29 |
Os01t0930900-00 | Rice | mitochondrion | 25.6 | 49.11 |
TraesCS4A01G179900.1 | Wheat | peroxisome | 25.05 | 48.91 |
TraesCS4D01G134700.1 | Wheat | peroxisome | 25.05 | 48.91 |
TraesCS3A01G448300.1 | Wheat | peroxisome, plastid | 24.86 | 48.91 |
TraesCS3B01G484300.1 | Wheat | peroxisome, plastid | 24.86 | 48.91 |
TraesCS3B01G435100.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 25.23 | 48.75 |
TraesCS3D01G440700.1 | Wheat | peroxisome | 24.86 | 48.73 |
GSMUA_Achr6P34030_001 | Banana | cytosol | 32.65 | 48.62 |
HORVU3Hr1G097180.1 | Barley | peroxisome, plastid | 24.86 | 48.38 |
Zm00001d011930_P001 | Maize | mitochondrion, plastid | 25.05 | 48.21 |
HORVU5Hr1G122860.4 | Barley | nucleus, peroxisome, plastid | 25.05 | 48.04 |
TraesCS5B01G542100.1 | Wheat | plastid | 12.62 | 47.89 |
OQU84126 | Sorghum | peroxisome | 25.23 | 47.89 |
TraesCS4B01G140000.1 | Wheat | peroxisome | 24.49 | 47.83 |
TraesCS4A01G343100.1 | Wheat | cytosol, peroxisome, plastid | 16.14 | 47.8 |
TraesCS2B01G386600.1 | Wheat | mitochondrion, plastid | 26.53 | 47.35 |
HORVU2Hr1G091780.5 | Barley | mitochondrion, plastid | 23.38 | 46.67 |
TraesCS2D01G366000.2 | Wheat | peroxisome | 25.97 | 46.05 |
Os01t0931000-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 12.8 | 45.39 |
CDY35991 | Canola | plastid | 10.39 | 45.16 |
Os11t0438000-02 | Rice | cytosol | 11.13 | 44.44 |
HORVU5Hr1G007770.4 | Barley | peroxisome | 22.63 | 44.04 |
TraesCS4A01G342900.1 | Wheat | cytosol, peroxisome, plastid | 8.16 | 44.0 |
TraesCS4A01G327900.1 | Wheat | mitochondrion, plastid | 26.16 | 43.79 |
HORVU3Hr1G090170.2 | Barley | mitochondrion, plastid | 24.86 | 43.65 |
TraesCS1B01G410300.1 | Wheat | peroxisome | 24.68 | 43.46 |
Zm00001d048726_P001 | Maize | cytosol | 17.81 | 42.86 |
Bra029705.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 12.24 | 40.49 |
GSMUA_Achr9P03450_001 | Banana | cytosol, nucleus, peroxisome | 32.1 | 36.73 |
Os04t0269100-00 | Rice | plastid | 17.07 | 36.22 |
GSMUA_Achr3P01040_001 | Banana | cytosol | 5.94 | 33.33 |
GSMUA_Achr3P01030_001 | Banana | mitochondrion | 11.32 | 27.6 |
GSMUA_Achr1P18200_001 | Banana | cytosol | 8.53 | 26.44 |
GSMUA_Achr2P01480_001 | Banana | peroxisome | 14.29 | 25.93 |
GSMUA_Achr4P24690_001 | Banana | cytosol | 14.1 | 25.5 |
GSMUA_Achr3P23590_001 | Banana | peroxisome | 13.91 | 25.25 |
GSMUA_Achr4P29030_001 | Banana | cytosol | 12.99 | 23.97 |
Protein Annotations
EnsemblPlants:GSMUA_Achr10P00490_001 | EnsemblPlants:GSMUA_Achr10T00490_001 | EnsemblPlantsGene:GSMUA_Achr10G00490_001 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
InterPro:Sc_DH/Rdtase_CS | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | SMART:SM00822 |
SUPFAM:SSF51735 | UniParc:UPI000294D760 | UniProt:M0RE76 | MapMan:50.1.1 | : | : |
Description
Tropinone reductase homolog At1g07440 [Source:GMGC_GENE;Acc:GSMUA_Achr10G00490_001]
Coordinates
chr10:+:1050394..1055097
Molecular Weight (calculated)
57615.2 Da
IEP (calculated)
7.115
GRAVY (calculated)
0.016
Length
539 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGVQNGNCS SFADRWSLVG ATALVTGGTK GIGFCIVEEL AGFGAAVHTC SRNEAELNKC LQEWKKKNFK VTGTVCDVSS PADRERLIEE VKTVFDGKLN
101: ILVNNAGTGY PKPVTQCTPG DYKFMTTTNV ESAFAMCQLA HPLLKASGRG SIVFNSSISG IMALEFLSIY GITKGALNQL ARSLACEWAK DNIRVNSVAP
201: GAVDTPLMKP AFENKEFVTR ESHNVPLGRL GVPEDVAPVV AFLCLPAASY ITGQVVVIDG GICQIKHIPR YGCYKTMADG ENAAGRWSLL GATALVTGGT
301: KGIGHGIVEE LARLGAAVHT CSRNEADLNK CLQKWEAEGF KVTGSICDVS SPDEREKLME KVRSTFDGRL DILVCNAGTG ILKPATLQTP EDYRYVMSIN
401: LDSAFHLSQL AYPHLKASGR ASIVFISSVV GFMAVDYLSV YGASKGALNQ LTRSLACEWA GDNIRTNCVA PGTIRTPLTE QGLQNDDFVT KETHRIPLGR
501: VGEPEEVAAL VGFLCLPASR YINGQVICAD GGRTVNGNI
101: ILVNNAGTGY PKPVTQCTPG DYKFMTTTNV ESAFAMCQLA HPLLKASGRG SIVFNSSISG IMALEFLSIY GITKGALNQL ARSLACEWAK DNIRVNSVAP
201: GAVDTPLMKP AFENKEFVTR ESHNVPLGRL GVPEDVAPVV AFLCLPAASY ITGQVVVIDG GICQIKHIPR YGCYKTMADG ENAAGRWSLL GATALVTGGT
301: KGIGHGIVEE LARLGAAVHT CSRNEADLNK CLQKWEAEGF KVTGSICDVS SPDEREKLME KVRSTFDGRL DILVCNAGTG ILKPATLQTP EDYRYVMSIN
401: LDSAFHLSQL AYPHLKASGR ASIVFISSVV GFMAVDYLSV YGASKGALNQ LTRSLACEWA GDNIRTNCVA PGTIRTPLTE QGLQNDDFVT KETHRIPLGR
501: VGEPEEVAAL VGFLCLPASR YINGQVICAD GGRTVNGNI
001: MAKTGESLRD KPRWSLVGMT ALVTGGSKGI GEAVVEELAT LGARIHTCAR DETQLQESLR KWQAKGFQVT TSVCDVSSRD KREKLMETVS TIFEGKLNIL
101: VNNVGTCIVK PTLQHTAEDF SFTMATNLES AFHLSQLAHP LLKASGSGSI VLISSVSGVV HVNGASIYGV SKGAMNQLGR NLACEWASDN IRTNSVCPWF
201: IETPLVTESL SNEEFRKEVE SRPPMGRVGE VNEVSSLVAF LCLPAASYIT GQTICVDGGF TVNGFSFKPL P
101: VNNVGTCIVK PTLQHTAEDF SFTMATNLES AFHLSQLAHP LLKASGSGSI VLISSVSGVV HVNGASIYGV SKGAMNQLGR NLACEWASDN IRTNSVCPWF
201: IETPLVTESL SNEEFRKEVE SRPPMGRVGE VNEVSSLVAF LCLPAASYIT GQTICVDGGF TVNGFSFKPL P
Arabidopsis Description
SDRTropinone reductase homolog At2g29360 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW19]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.