Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P01480_001 | Banana | peroxisome | 87.21 | 87.21 |
| Os04t0614000-01 | Rice | cytosol | 81.14 | 80.6 |
| VIT_19s0085g00500.t01 | Wine grape | peroxisome | 79.8 | 79.8 |
| EES11416 | Sorghum | mitochondrion, peroxisome, plastid | 78.45 | 78.45 |
| EES11417 | Sorghum | peroxisome | 78.45 | 78.45 |
| Zm00001d026290_P001 | Maize | peroxisome | 78.45 | 78.19 |
| Solyc07g066630.2.1 | Tomato | plastid | 78.45 | 77.93 |
| TraesCS2B01G441000.1 | Wheat | peroxisome | 78.11 | 77.59 |
| CDX73802 | Canola | peroxisome | 77.78 | 77.52 |
| Zm00001d002332_P026 | Maize | peroxisome | 77.44 | 77.44 |
| TraesCS2D01G418900.1 | Wheat | peroxisome | 77.78 | 77.26 |
| HORVU2Hr1G098920.1 | Barley | peroxisome | 77.78 | 77.26 |
| TraesCS2A01G422500.1 | Wheat | golgi, peroxisome | 77.44 | 76.92 |
| Bra034728.1-P | Field mustard | cytosol | 76.09 | 76.87 |
| CDY08402 | Canola | cytosol | 76.09 | 76.87 |
| Bra001471.1-P | Field mustard | peroxisome | 77.1 | 76.85 |
| CDY00799 | Canola | peroxisome | 77.1 | 76.85 |
| AT3G12800.1 | Thale cress | peroxisome | 76.43 | 76.17 |
| PGSC0003DMT400056868 | Potato | cytosol, peroxisome, plastid | 43.77 | 76.02 |
| VIT_01s0011g01520.t01 | Wine grape | peroxisome | 75.76 | 75.76 |
| KRH13054 | Soybean | nucleus | 75.42 | 75.17 |
| KRH44885 | Soybean | nucleus | 74.41 | 74.16 |
| GSMUA_Achr3P01040_001 | Banana | cytosol | 10.1 | 31.25 |
| GSMUA_Achr9P03440_001 | Banana | cytosol | 26.6 | 29.15 |
| GSMUA_Achr9P03470_001 | Banana | cytosol | 26.26 | 29.0 |
| GSMUA_Achr9P03430_001 | Banana | cytosol, mitochondrion, plastid | 24.92 | 28.24 |
| GSMUA_Achr11P... | Banana | cytosol | 24.92 | 27.61 |
| GSMUA_Achr10P... | Banana | cytosol | 24.24 | 26.57 |
| GSMUA_Achr4P24690_001 | Banana | cytosol | 25.25 | 25.17 |
| GSMUA_Achr3P01030_001 | Banana | mitochondrion | 18.52 | 24.89 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 10.44 | 24.41 |
| GSMUA_Achr9P03420_001 | Banana | mitochondrion | 23.57 | 23.26 |
| GSMUA_Achr4P29030_001 | Banana | cytosol | 21.89 | 22.26 |
| GSMUA_Achr5P04560_001 | Banana | cytosol | 25.59 | 22.03 |
| GSMUA_Achr6P34030_001 | Banana | cytosol | 24.24 | 19.89 |
| GSMUA_Achr1P18200_001 | Banana | cytosol | 11.45 | 19.54 |
| GSMUA_Achr9P03450_001 | Banana | cytosol, nucleus, peroxisome | 27.27 | 17.2 |
| GSMUA_Achr10P... | Banana | cytosol | 25.25 | 13.91 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P23590_001 | EnsemblPlants:GSMUA_Achr3T23590_001 | EnsemblPlantsGene:GSMUA_Achr3G23590_001 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR43296 | PANTHER:PTHR43296:SF1 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | SEG:seg |
| SUPFAM:SSF51735 | UniParc:UPI00029614AF | UniProt:M0SH75 | MapMan:5.7.3.5.3 | : | : |
Description
Peroxisomal 2,4-dienoyl-CoA reductase [Source:GMGC_GENE;Acc:GSMUA_Achr3G23590_001]
Coordinates
chr3:-:24397332..24401773
Molecular Weight (calculated)
31730.2 Da
IEP (calculated)
9.587
GRAVY (calculated)
-0.088
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MESPFKADVL NGKVALITGG GSGIGLEIST QFGRHGAAVA IMGRRRQVVD AAVAALRSEG IRAIGVEGDV RKQEDAARVV EETFKHFGKL DILVNGAAGN
101: FLASPEDLSP NGFRTVMDID SVGTFTMCHE ALKYLKKGGP GKGPSAGGII LNISATLHYT ASWYQIHVSA AKAAVDSITR SLALEWGTDY SIRVNGIAPG
201: PIGDTPGMRK LAPEEMQNNY SELGPLYKLG ERWDIAMAAL YLASDAGKYV NGTTVVVDGG LWLSRPRYIA KEEVRKLSRV VEKKSRNSAV IIPTSKL
101: FLASPEDLSP NGFRTVMDID SVGTFTMCHE ALKYLKKGGP GKGPSAGGII LNISATLHYT ASWYQIHVSA AKAAVDSITR SLALEWGTDY SIRVNGIAPG
201: PIGDTPGMRK LAPEEMQNNY SELGPLYKLG ERWDIAMAAL YLASDAGKYV NGTTVVVDGG LWLSRPRYIA KEEVRKLSRV VEKKSRNSAV IIPTSKL
001: MDSPFKPDVV RGQVALITGG GSGIGFEISS QFGKHGASIA IMGRRKQVLD DAVSALRSLG IQAIGLEGDV RKQEDARRVV EATFQHFGKL DILVNAAAGN
101: FLAAAEDLSP NGFRTVLDID AVGTFNMCHA ALKYLKKGAP GRDSSSGGGS IINISATLHY TASWYQIHVS AAKAAVDATT RNLALEWGTD YDIRVNGIAP
201: GPIGGTPGMS KLVPEEIENK TREYMPLYKV GEKWDIAMAA LYLSCDSGKY VSGLTMVVDG GLWLSKPRHL PKEAVKQLSR AVEKRSRAKP VGLPTSKL
101: FLAAAEDLSP NGFRTVLDID AVGTFNMCHA ALKYLKKGAP GRDSSSGGGS IINISATLHY TASWYQIHVS AAKAAVDATT RNLALEWGTD YDIRVNGIAP
201: GPIGGTPGMS KLVPEEIENK TREYMPLYKV GEKWDIAMAA LYLSCDSGKY VSGLTMVVDG GLWLSKPRHL PKEAVKQLSR AVEKRSRAKP VGLPTSKL
Arabidopsis Description
SDRBUncharacterized protein At3g12790 [Source:UniProtKB/TrEMBL;Acc:Q0WMN4]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.