Factsheet for TraesCS2A01G422500.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi

Predictor Summary:

peroxisome 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome
Any Predictor:	peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	peroxisome

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G441000.1	Wheat	peroxisome	99.33	99.33
TraesCS2D01G418900.1	Wheat	peroxisome	99.0	99.0
HORVU2Hr1G098920.1	Barley	peroxisome	99.0	99.0
Zm00001d002332_P026	Maize	peroxisome	90.97	91.58
Os04t0614000-01	Rice	cytosol	90.97	90.97
Zm00001d026290_P001	Maize	peroxisome	88.96	89.26
EES11417	Sorghum	peroxisome	88.63	89.23
EES11416	Sorghum	mitochondrion, peroxisome, plastid	88.29	88.89
GSMUA_Achr2P01480_001	Banana	peroxisome	77.59	78.11
GSMUA_Achr3P23590_001	Banana	peroxisome	76.92	77.44
VIT_17s0000g08740.t01	Wine grape	cytosol	31.1	75.61
PGSC0003DMT400056868	Potato	cytosol, peroxisome, plastid	41.81	73.1
CDX73802	Canola	peroxisome	70.9	71.14
CDY08402	Canola	cytosol	69.9	71.09
Bra034728.1-P	Field mustard	cytosol	69.9	71.09
CDY00799	Canola	peroxisome	70.57	70.81
Bra001471.1-P	Field mustard	peroxisome	70.23	70.47
Solyc07g066630.2.1	Tomato	plastid	70.23	70.23
AT3G12800.1	Thale cress	peroxisome	69.9	70.13
KRH13054	Soybean	nucleus	69.23	69.46
KRH44885	Soybean	nucleus	67.56	67.79
TraesCS4A01G342900.1	Wheat	cytosol, peroxisome, plastid	10.37	31.0
TraesCS1A01G383700.1	Wheat	cytosol, extracellular, plastid	14.72	28.95
TraesCS4A01G328000.1	Wheat	cytosol, peroxisome, plastid	25.42	28.9
TraesCS4A01G343100.1	Wheat	cytosol, peroxisome, plastid	17.39	28.57
TraesCS2A01G497100.1	Wheat	golgi, peroxisome, plastid	25.08	28.52
TraesCS5A01G164400.1	Wheat	peroxisome	24.08	28.46
TraesCS3A01G401900.1	Wheat	extracellular, mitochondrion, plastid	24.75	28.14
TraesCS4A01G179900.1	Wheat	peroxisome	25.42	27.54
TraesCS1A01G390900.1	Wheat	mitochondrion, plastid	23.41	27.03
TraesCS3A01G402000.1	Wheat	mitochondrion, plastid	23.75	27.0
TraesCS2A01G369400.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	24.08	26.97
TraesCS3A01G448300.1	Wheat	peroxisome, plastid	24.41	26.64
TraesCS5A01G029700.1	Wheat	plastid	22.74	25.86
TraesCS1A01G390800.1	Wheat	mitochondrion, plastid	24.08	25.71
TraesCS4A01G094500.1	Wheat	cytosol, peroxisome, plastid	23.08	25.46
TraesCS4A01G094400.1	Wheat	plastid	23.08	25.37
TraesCS4A01G327900.1	Wheat	mitochondrion, plastid	24.75	22.98
TraesCS1A01G083800.1	Wheat	plastid	24.75	21.33

Protein Annotations

EnsemblPlants:TraesCS2A01G422500.1	EnsemblPlantsGene:TraesCS2A01G422500	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR43296
PANTHER:PTHR43296:SF1	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	SEG:seg	SUPFAM:SSF51735
TIGR:cd05369	MapMan:5.7.3.5.3	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:677485710..677488019

Molecular Weight (calculated)

31793.6 Da

IEP (calculated)

9.977

GRAVY (calculated)

-0.074

Length

299 amino acids

Sequence
(BLAST)

001: MATESPFRAD VLRGKAALVT GGGSGICFEI AAQLARHGAH VAIMGRRREV LDKAVAALRS EGLRAVGFQG DVRNQKDAAR VLASTVEHFG KLDILVNGAA
101: GNFLASPEDL TPKGFRTVLE IDTVGTYTMC YEALKYLKKG GPGRGPSTGG LIINISATLH YTASWYQIHV SAAKAGVDSI TRTLALEWGT DYEIRVNGIA
201: PGPIGGTPGL RKLAPDEMGK GKREMMPLFK LGETRDIAMA ALYLASDAGK YVNGTTLVVD GGLWLSHPRH IPKEEVKELS KVIEKKVRAS GVGVPSSKL

Best Arabidopsis Sequence Match ( AT3G12800.1 )
(BLAST)

001: MDSPFKPDVV RGQVALITGG GSGIGFEISS QFGKHGASIA IMGRRKQVLD DAVSALRSLG IQAIGLEGDV RKQEDARRVV EATFQHFGKL DILVNAAAGN
101: FLAAAEDLSP NGFRTVLDID AVGTFNMCHA ALKYLKKGAP GRDSSSGGGS IINISATLHY TASWYQIHVS AAKAAVDATT RNLALEWGTD YDIRVNGIAP
201: GPIGGTPGMS KLVPEEIENK TREYMPLYKV GEKWDIAMAA LYLSCDSGKY VSGLTMVVDG GLWLSKPRHL PKEAVKQLSR AVEKRSRAKP VGLPTSKL

Arabidopsis Description

SDRBUncharacterized protein At3g12790 [Source:UniProtKB/TrEMBL;Acc:Q0WMN4]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.