Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G398900.1 | Wheat | peroxisome | 66.41 | 96.09 |
| TraesCS1B01G419000.1 | Wheat | mitochondrion, plastid | 67.18 | 95.6 |
| HORVU1Hr1G086200.3 | Barley | peroxisome, plastid | 94.21 | 91.04 |
| TraesCS1A01G390800.1 | Wheat | mitochondrion, plastid | 83.01 | 76.79 |
| TraesCS2A01G497100.1 | Wheat | golgi, peroxisome, plastid | 71.81 | 70.72 |
| KXG29038 | Sorghum | mitochondrion, plastid | 70.66 | 69.32 |
| TraesCS1A01G383700.1 | Wheat | cytosol, extracellular, plastid | 40.54 | 69.08 |
| TraesCS5A01G029700.1 | Wheat | plastid | 69.88 | 68.82 |
| TraesCS3A01G401900.1 | Wheat | extracellular, mitochondrion, plastid | 69.5 | 68.44 |
| EES10195 | Sorghum | mitochondrion | 69.5 | 68.18 |
| TraesCS3A01G402000.1 | Wheat | mitochondrion, plastid | 67.95 | 66.92 |
| TraesCS4A01G343100.1 | Wheat | cytosol, peroxisome, plastid | 46.33 | 65.93 |
| TraesCS2A01G369400.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 67.95 | 65.92 |
| TraesCS4A01G328000.1 | Wheat | cytosol, peroxisome, plastid | 66.02 | 65.02 |
| Zm00001d007687_P001 | Maize | extracellular | 66.02 | 65.02 |
| KXG29040 | Sorghum | cytosol, peroxisome, plastid | 60.62 | 64.88 |
| EES10198 | Sorghum | mitochondrion, plastid | 67.18 | 64.21 |
| TraesCS4A01G342900.1 | Wheat | cytosol, peroxisome, plastid | 22.39 | 58.0 |
| TraesCS4A01G327900.1 | Wheat | mitochondrion, plastid | 71.43 | 57.45 |
| TraesCS3A01G448300.1 | Wheat | peroxisome, plastid | 60.62 | 57.3 |
| TraesCS4A01G179900.1 | Wheat | peroxisome | 60.62 | 56.88 |
| Zm00001d048726_P001 | Maize | cytosol | 48.65 | 56.25 |
| GSMUA_Achr9P03470_001 | Banana | cytosol | 55.98 | 53.9 |
| GSMUA_Achr11P... | Banana | cytosol | 54.83 | 52.99 |
| GSMUA_Achr9P03440_001 | Banana | cytosol | 54.83 | 52.4 |
| TraesCS4A01G094400.1 | Wheat | plastid | 54.05 | 51.47 |
| TraesCS4A01G094500.1 | Wheat | cytosol, peroxisome, plastid | 53.67 | 51.29 |
| GSMUA_Achr9P03430_001 | Banana | cytosol, mitochondrion, plastid | 51.74 | 51.15 |
| GSMUA_Achr9P03420_001 | Banana | mitochondrion | 55.21 | 47.51 |
| GSMUA_Achr5P04560_001 | Banana | cytosol | 57.92 | 43.48 |
| CDY35991 | Canola | plastid | 19.69 | 41.13 |
| GSMUA_Achr6P34030_001 | Banana | cytosol | 51.74 | 37.02 |
| Bra029705.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 22.01 | 34.97 |
| TraesCS5A01G164400.1 | Wheat | peroxisome | 31.66 | 32.41 |
| GSMUA_Achr9P03450_001 | Banana | cytosol, nucleus, peroxisome | 56.76 | 31.21 |
| GSMUA_Achr10P... | Banana | cytosol | 54.05 | 25.97 |
| TraesCS1A01G083800.1 | Wheat | plastid | 32.43 | 24.21 |
| TraesCS2A01G422500.1 | Wheat | golgi, peroxisome | 27.03 | 23.41 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G390900.1 | EnsemblPlantsGene:TraesCS1A01G390900 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | InterPro:Sc_DH/Rdtase_CS | PANTHER:PTHR42898 |
| PANTHER:PTHR42898:SF1 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | SEG:seg |
| SMART:SM00822 | SUPFAM:SSF51735 | MapMan:50.1.1 | : | : | : |
Description
No Description!
Coordinates
chr1A:+:558148139..558150111
Molecular Weight (calculated)
27808.3 Da
IEP (calculated)
5.163
GRAVY (calculated)
0.013
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTSREKRWS LAGATALVTG GSKGIGRAIV EELAGFGARV HTCSRNAAEL EECRRQWEDE KLAVTVSVCD VSVRSERVKL METVRESFDG KLDILVNNAG
101: QLVLKAATEW TAEDYAQLME TNLESSFHLS QLAHPLLVNA SVLGGGSIVN ISSVGGIFGY PGLALYGITK GGMNQFTRSL ATEWARDNIR VNSVAPGIVS
201: TDMIKDLEPD ALEEACSRIP MGRSGKPTEV ASVVSFLCMP TASYITGQVI CIDGGRTIY
101: QLVLKAATEW TAEDYAQLME TNLESSFHLS QLAHPLLVNA SVLGGGSIVN ISSVGGIFGY PGLALYGITK GGMNQFTRSL ATEWARDNIR VNSVAPGIVS
201: TDMIKDLEPD ALEEACSRIP MGRSGKPTEV ASVVSFLCMP TASYITGQVI CIDGGRTIY
001: MAKAGENSRD KSRWSLEGMT ALVTGGSKGL GEAVVEELAM LGARVHTCAR DETQLQERLR EWQAKGFEVT TSVCDVSSRE QREKLMETVS SVFQGKLNIL
101: VNNAGTGIIK PSTEYTAEDY SFLMATNLES AFHLSQIAHP LLKASGSGSI VFMSSVAGLV HTGASIYGAS KGAMNQLGRS LACEWASDNI RVNSVCPWVI
201: TTPLTSFIFS DEKLRKAVED KTPMGRVGEA NEVSSLVAFL CFPAASYITG QTICVDGGAS VNGFSFKP
101: VNNAGTGIIK PSTEYTAEDY SFLMATNLES AFHLSQIAHP LLKASGSGSI VFMSSVAGLV HTGASIYGAS KGAMNQLGRS LACEWASDNI RVNSVCPWVI
201: TTPLTSFIFS DEKLRKAVED KTPMGRVGEA NEVSSLVAFL CFPAASYITG QTICVDGGAS VNGFSFKP
Arabidopsis Description
Tropinone reductase homolog At2g29150 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW03]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.