Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G434900.1 | Wheat | cytosol, mitochondrion, plastid | 36.26 | 75.0 |
| TraesCS1A01G390900.1 | Wheat | mitochondrion, plastid | 95.6 | 67.18 |
| HORVU1Hr1G086200.3 | Barley | peroxisome, plastid | 92.86 | 63.06 |
| TraesCS1B01G418900.1 | Wheat | mitochondrion | 83.52 | 58.24 |
| TraesCS1D01G398900.1 | Wheat | peroxisome | 53.85 | 54.75 |
| Zm00001d048726_P001 | Maize | cytosol | 63.19 | 51.34 |
| EES10195 | Sorghum | mitochondrion | 72.53 | 50.0 |
| TraesCS5B01G028300.1 | Wheat | plastid | 71.43 | 49.43 |
| TraesCS2B01G525400.1 | Wheat | endoplasmic reticulum, peroxisome, plastid | 73.08 | 49.26 |
| TraesCS5B01G542200.1 | Wheat | cytosol, peroxisome, plastid | 70.88 | 49.05 |
| KXG29038 | Sorghum | mitochondrion, plastid | 70.88 | 48.86 |
| TraesCS5B01G531800.1 | Wheat | cytosol, peroxisome, plastid | 67.58 | 48.24 |
| TraesCS5B01G531600.1 | Wheat | mitochondrion | 68.68 | 48.08 |
| TraesCS3B01G435100.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 73.63 | 48.03 |
| TraesCS5B01G310100.1 | Wheat | peroxisome | 66.48 | 46.36 |
| Zm00001d007687_P001 | Maize | extracellular | 66.48 | 46.01 |
| EES10198 | Sorghum | mitochondrion, plastid | 67.58 | 45.39 |
| KXG29040 | Sorghum | cytosol, peroxisome, plastid | 58.79 | 44.21 |
| TraesCS1B01G410300.1 | Wheat | peroxisome | 71.98 | 42.81 |
| TraesCS2B01G386600.1 | Wheat | mitochondrion, plastid | 70.33 | 42.38 |
| TraesCS3B01G484300.1 | Wheat | peroxisome, plastid | 61.54 | 40.88 |
| TraesCS4B01G140000.1 | Wheat | peroxisome | 59.89 | 39.49 |
| GSMUA_Achr11P... | Banana | cytosol | 57.69 | 39.18 |
| GSMUA_Achr9P03470_001 | Banana | cytosol | 57.69 | 39.03 |
| GSMUA_Achr9P03440_001 | Banana | cytosol | 56.04 | 37.64 |
| GSMUA_Achr9P03430_001 | Banana | cytosol, mitochondrion, plastid | 53.3 | 37.02 |
| TraesCS4B01G210000.1 | Wheat | plastid | 54.4 | 36.4 |
| TraesCS4B01G209900.1 | Wheat | peroxisome | 53.85 | 36.3 |
| GSMUA_Achr9P03420_001 | Banana | mitochondrion | 56.59 | 34.22 |
| GSMUA_Achr5P04560_001 | Banana | cytosol | 59.89 | 31.59 |
| TraesCS5B01G542100.1 | Wheat | plastid | 23.08 | 29.58 |
| GSMUA_Achr6P34030_001 | Banana | cytosol | 53.3 | 26.8 |
| GSMUA_Achr9P03450_001 | Banana | cytosol, nucleus, peroxisome | 58.79 | 22.72 |
| TraesCS5B01G161900.1 | Wheat | peroxisome | 31.32 | 22.53 |
| Bra029705.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 19.23 | 21.47 |
| GSMUA_Achr10P... | Banana | cytosol | 54.95 | 18.55 |
| TraesCS2B01G441000.1 | Wheat | peroxisome | 26.92 | 16.39 |
| CDY35991 | Canola | plastid | 10.99 | 16.13 |
| TraesCS1B01G101100.1 | Wheat | plastid | 28.02 | 14.66 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G419000.1 | EnsemblPlantsGene:TraesCS1B01G419000 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | InterPro:Sc_DH/Rdtase_CS | PANTHER:PTHR42898 |
| PANTHER:PTHR42898:SF1 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | SEG:seg |
| SUPFAM:SSF51735 | TMHMM:TMhelix | MapMan:50.1.1 | : | : | : |
Description
No Description!
Coordinates
chr1B:+:642637138..642640144
Molecular Weight (calculated)
19559.5 Da
IEP (calculated)
6.263
GRAVY (calculated)
0.023
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTSREKRWS LAGATALVTG GSKGIGRAIV EELAGFGARV HTCSRNAAEL EECRRQWEEE KLAVTVSVCD VSVRAERVKL METVRDSFDG KLDILVNNAG
101: QLVLKAAIEW TADDYAQLME TNLESNFHLS QLAHPLLINA SILGGGSIVN ISSVGGIFGY PGLALYGITK GGMNQFTRSL AT
101: QLVLKAAIEW TADDYAQLME TNLESNFHLS QLAHPLLINA SILGGGSIVN ISSVGGIFGY PGLALYGITK GGMNQFTRSL AT
001: MAKAGENSRD KSRWSLEGMT ALVTGGSKGL GEAVVEELAM LGARVHTCAR DETQLQERLR EWQAKGFEVT TSVCDVSSRE QREKLMETVS SVFQGKLNIL
101: VNNAGTGIIK PSTEYTAEDY SFLMATNLES AFHLSQIAHP LLKASGSGSI VFMSSVAGLV HTGASIYGAS KGAMNQLGRS LACEWASDNI RVNSVCPWVI
201: TTPLTSFIFS DEKLRKAVED KTPMGRVGEA NEVSSLVAFL CFPAASYITG QTICVDGGAS VNGFSFKP
101: VNNAGTGIIK PSTEYTAEDY SFLMATNLES AFHLSQIAHP LLKASGSGSI VFMSSVAGLV HTGASIYGAS KGAMNQLGRS LACEWASDNI RVNSVCPWVI
201: TTPLTSFIFS DEKLRKAVED KTPMGRVGEA NEVSSLVAFL CFPAASYITG QTICVDGGAS VNGFSFKP
Arabidopsis Description
Tropinone reductase homolog At2g29150 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW03]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.