Factsheet for TraesCS2B01G525400.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, peroxisome

Predictor Summary:

peroxisome 1
mitochondrion 1
endoplasmic reticulum 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, peroxisome, plastid
Any Predictor:	endoplasmic reticulum, mitochondrion, peroxisome, plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G497100.1	Wheat	golgi, peroxisome, plastid	95.19	97.72
TraesCS2D01G497300.1	Wheat	cytosol, peroxisome, plastid	95.19	97.72
TraesCS5B01G542200.1	Wheat	cytosol, peroxisome, plastid	81.48	83.65
TraesCS5B01G542100.1	Wheat	plastid	43.7	83.1
TraesCS5B01G531800.1	Wheat	cytosol, peroxisome, plastid	77.41	81.96
TraesCS5B01G531600.1	Wheat	mitochondrion	77.04	80.0
TraesCS3B01G434900.1	Wheat	cytosol, mitochondrion, plastid	25.56	78.41
TraesCS5B01G310100.1	Wheat	peroxisome	71.11	73.56
TraesCS1B01G419000.1	Wheat	mitochondrion, plastid	49.26	73.08
TraesCS1B01G418900.1	Wheat	mitochondrion	67.04	69.35
KXG29040	Sorghum	cytosol, peroxisome, plastid	59.26	66.12
EES10195	Sorghum	mitochondrion	64.44	65.91
TraesCS5B01G028300.1	Wheat	plastid	64.07	65.78
KXG29038	Sorghum	mitochondrion, plastid	62.96	64.39
EES10198	Sorghum	mitochondrion, plastid	64.44	64.21
TraesCS3B01G435100.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	65.56	63.44
Zm00001d007687_P001	Maize	extracellular	60.74	62.36
Zm00001d048726_P001	Maize	cytosol	48.15	58.04
TraesCS2B01G386600.1	Wheat	mitochondrion, plastid	63.33	56.62
TraesCS3B01G484300.1	Wheat	peroxisome, plastid	57.41	56.57
TraesCS1B01G410300.1	Wheat	peroxisome	63.7	56.21
GSMUA_Achr11P...	Banana	cytosol	53.33	53.73
TraesCS4B01G140000.1	Wheat	peroxisome	54.81	53.62
GSMUA_Achr9P03470_001	Banana	cytosol	53.33	53.53
GSMUA_Achr9P03440_001	Banana	cytosol	51.48	51.29
TraesCS4B01G210000.1	Wheat	plastid	49.63	49.26
GSMUA_Achr9P03430_001	Banana	cytosol, mitochondrion, plastid	47.78	49.24
TraesCS4B01G209900.1	Wheat	peroxisome	48.89	48.89
GSMUA_Achr9P03420_001	Banana	mitochondrion	50.37	45.18
GSMUA_Achr5P04560_001	Banana	cytosol	53.7	42.03
CDY35991	Canola	plastid	18.15	39.52
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	22.96	38.04
GSMUA_Achr6P34030_001	Banana	cytosol	50.74	37.85
TraesCS5B01G161900.1	Wheat	peroxisome	32.96	35.18
GSMUA_Achr9P03450_001	Banana	cytosol, nucleus, peroxisome	53.33	30.57
GSMUA_Achr10P...	Banana	cytosol	52.22	26.16
TraesCS2B01G441000.1	Wheat	peroxisome	27.41	24.75
TraesCS1B01G101100.1	Wheat	plastid	28.89	22.41

Protein Annotations

EnsemblPlants:TraesCS2B01G525400.1	EnsemblPlantsGene:TraesCS2B01G525400	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	InterPro:Sc_DH/Rdtase_CS	PANTHER:PTHR42898
PANTHER:PTHR42898:SF1	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	SEG:seg
SUPFAM:SSF51735	MapMan:50.1.1	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:719496495..719516979

Molecular Weight (calculated)

28927.8 Da

IEP (calculated)

6.508

GRAVY (calculated)

0.039

Length

270 amino acids

Sequence
(BLAST)

001: MAVDYGSREE RWSLAGTTAL VTGGSKGIGH AIVEELAGFG ARVHTCSRNG VELEECRRRW GEKNLQVTVS VCDVSIRADR EKLMETVRET FNSKLDILVN
101: NAGQLLFKPT TECTVVEYSN LLTTNLESSF HLSQLAHPLL IHASIAGGGS IINMSSIGGS IGYAGSAIYA TTKGAMNQLT RSLATEWASD KIRVNGIAPG
201: FVTTDMLKDL LLLSPLMDTE YVKEEHSKTP LGRSGKPVEI ASAVSFLCMP AASFITGQII CIDGGRTISA

Best Arabidopsis Sequence Match ( AT1G07440.1 )
(BLAST)

001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG

Arabidopsis Description

Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.