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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • mitochondrion 3
  • cytosol 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:mitochondrion, plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:plastid
extracellular: 20408568
msms PMID: 20408568 doi
W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G434900.1 Wheat cytosol, mitochondrion, plastid 25.86 77.27
KXG29040 Sorghum cytosol, peroxisome, plastid 67.3 73.14
TraesCS1A01G383700.1 Wheat cytosol, extracellular, plastid 41.44 71.71
TraesCS3D01G396800.1 Wheat extracellular, mitochondrion, plastid 70.72 70.72
TraesCS3A01G401900.1 Wheat extracellular, mitochondrion, plastid 70.34 70.34
TraesCS3D01G396900.1 Wheat mitochondrion, plastid 68.06 68.06
HORVU1Hr1G084560.2 Barley extracellular, mitochondrion, plastid 67.68 67.68
TraesCS1B01G419000.1 Wheat mitochondrion, plastid 46.01 66.48
TraesCS5D01G545800.1 Wheat cytosol, mitochondrion, plastid 66.54 66.29
TraesCS3A01G402000.1 Wheat mitochondrion, plastid 66.16 66.16
TraesCS1A01G390900.1 Wheat mitochondrion, plastid 65.02 66.02
TraesCS5B01G531800.1 Wheat cytosol, peroxisome, plastid 63.88 65.88
Zm00001d048723_P001 Maize mitochondrion 65.78 65.53
TraesCS1B01G418900.1 Wheat mitochondrion 64.64 65.13
TraesCS5B01G028300.1 Wheat plastid 65.02 65.02
TraesCS5B01G310100.1 Wheat peroxisome 64.26 64.75
TraesCS1D01G398800.1 Wheat mitochondrion 64.26 64.75
TraesCS4D01G309300.1 Wheat cytosol, peroxisome, plastid 64.64 64.64
TraesCS5D01G530100.1 Wheat peroxisome 63.88 64.62
TraesCS5B01G531600.1 Wheat mitochondrion 63.88 64.62
TraesCS5D01G316400.1 Wheat cytosol, peroxisome, plastid 63.88 64.37
TraesCS3B01G435100.1 Wheat cytosol, mitochondrion, peroxisome, plastid 68.06 64.16
TraesCS5A01G029700.1 Wheat plastid 63.88 63.88
TraesCS5B01G542200.1 Wheat cytosol, peroxisome, plastid 63.88 63.88
TraesCS1D01G398900.1 Wheat peroxisome 43.35 63.69
TraesCS2D01G497300.1 Wheat cytosol, peroxisome, plastid 63.5 63.5
HORVU1Hr1G086200.3 Barley peroxisome, plastid 64.64 63.43
TraesCS2A01G497100.1 Wheat golgi, peroxisome, plastid 63.12 63.12
TraesCS5D01G545700.1 Wheat peroxisome 63.12 63.12
TraesCS4A01G328000.1 Wheat cytosol, peroxisome, plastid 63.12 63.12
HORVU1Hr1G086190.1 Barley peroxisome 46.01 62.37
TraesCS5D01G037500.1 Wheat plastid 61.98 61.98
TraesCS4A01G343100.1 Wheat cytosol, peroxisome, plastid 42.59 61.54
TraesCS2B01G525400.1 Wheat endoplasmic reticulum, peroxisome, plastid 62.36 60.74
TraesCS1A01G390800.1 Wheat mitochondrion, plastid 64.64 60.71
HORVU3Hr1G090170.2 Barley mitochondrion, plastid 70.34 60.26
Zm00001d048726_P001 Maize cytosol 50.95 59.82
TraesCS1B01G410300.1 Wheat peroxisome 68.44 58.82
TraesCS5B01G542100.1 Wheat plastid 31.56 58.45
Zm00001d011930_P001 Maize mitochondrion, plastid 61.98 58.21
HORVU5Hr1G007770.4 Barley peroxisome 60.46 57.4
HORVU5Hr1G122860.4 Barley nucleus, peroxisome, plastid 61.22 57.3
HORVU0Hr1G027400.1 Barley peroxisome 42.59 55.72
GSMUA_Achr9P03470_001 Banana cytosol 54.75 53.53
TraesCS4A01G327900.1 Wheat mitochondrion, plastid 64.64 52.8
GSMUA_Achr11P... Banana cytosol 52.47 51.49
GSMUA_Achr9P03430_001 Banana cytosol, mitochondrion, plastid 50.19 50.38
Zm00001d028575_P001 Maize extracellular 51.71 49.82
GSMUA_Achr9P03440_001 Banana cytosol 49.81 48.34
GSMUA_Achr9P03420_001 Banana mitochondrion 53.61 46.84
GSMUA_Achr5P04560_001 Banana cytosol 55.13 42.03
CDY35991 Canola plastid 19.01 40.32
Bra029705.1-P Field mustard cytosol, mitochondrion, nucleus, plastid 23.57 38.04
GSMUA_Achr6P34030_001 Banana cytosol 49.43 35.91
Zm00001d019439_P001 Maize extracellular 30.8 32.02
GSMUA_Achr9P03450_001 Banana cytosol, nucleus, peroxisome 54.37 30.36
Zm00001d038897_P001 Maize peroxisome 30.42 28.67
Zm00001d026290_P001 Maize peroxisome 29.66 26.17
GSMUA_Achr10P... Banana cytosol 52.85 25.79
Zm00001d002332_P026 Maize peroxisome 28.9 25.59
Zm00001d006796_P001 Maize extracellular 30.04 22.07
Protein Annotations
EntrezGene:100273624Gene3D:3.40.50.720MapMan:50.1.1UniProt:B4FFM6EMBL:BT035914EMBL:BT041520
EMBL:BT042999GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0016491
GO:GO:0055114InterPro:NAD(P)-bd_dom_sfProteinID:ONM27337.1PFAM:PF13561PRINTS:PR00080PRINTS:PR00081
ScanProsite:PS00061PANTHER:PTHR42898PANTHER:PTHR42898:SF1InterPro:SDR_famSMART:SM00822SUPFAM:SSF51735
InterPro:Sc_DH/Rdtase_CSUniParc:UPI00017B7225EnsemblPlantsGene:Zm00001d007687EnsemblPlants:Zm00001d007687_P001EnsemblPlants:Zm00001d007687_T001SEG:seg
Description
Tropinone reductase homolog
Coordinates
chr2:+:237421455..237422773
Molecular Weight (calculated)
27789.7 Da
IEP (calculated)
6.274
GRAVY (calculated)
0.229
Length
263 amino acids
Sequence
(BLAST)
001: MAPGGSGERW SLAGATALVT GGSKGIGQAV VEELARLGAR VHTCARSAAD LEECRRRWAE KGLRVTVSVC DVAVRADRER LVLDTVSAAF DGKLDILVNN
101: AALLLLKPAA EWAAEDYARI MATNLESCLH ISQLAHPLLL NASVAGGASI VNVSSIASVL GFPQEVMYSV TKGGLNQMTR SLAVEWACDR IRVNCVAPGV
201: IMTDMGKELP AALVEQERSR IPLRRTGEPE EVASLVSFLC MPAASYVTGQ VIFVDGGRTI SGA
Best Arabidopsis Sequence Match ( AT5G06060.1 )
(BLAST)
001: METDKRWSLA GKTALVTGGT RGIGRAVVEE LAKFGAKVHT CSRNQEELNA CLNDWKANGL VVSGSVCDAS VRDQREKLIQ EASSAFSGKL NILINNVGTN
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP
Arabidopsis Description
Tropinone reductase homolog At5g06060 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHT0]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.