Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
20408568
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3B01G434900.1 | Wheat | cytosol, mitochondrion, plastid | 25.86 | 77.27 |
KXG29040 | Sorghum | cytosol, peroxisome, plastid | 67.3 | 73.14 |
TraesCS1A01G383700.1 | Wheat | cytosol, extracellular, plastid | 41.44 | 71.71 |
TraesCS3D01G396800.1 | Wheat | extracellular, mitochondrion, plastid | 70.72 | 70.72 |
TraesCS3A01G401900.1 | Wheat | extracellular, mitochondrion, plastid | 70.34 | 70.34 |
TraesCS3D01G396900.1 | Wheat | mitochondrion, plastid | 68.06 | 68.06 |
HORVU1Hr1G084560.2 | Barley | extracellular, mitochondrion, plastid | 67.68 | 67.68 |
TraesCS1B01G419000.1 | Wheat | mitochondrion, plastid | 46.01 | 66.48 |
TraesCS5D01G545800.1 | Wheat | cytosol, mitochondrion, plastid | 66.54 | 66.29 |
TraesCS3A01G402000.1 | Wheat | mitochondrion, plastid | 66.16 | 66.16 |
TraesCS1A01G390900.1 | Wheat | mitochondrion, plastid | 65.02 | 66.02 |
TraesCS5B01G531800.1 | Wheat | cytosol, peroxisome, plastid | 63.88 | 65.88 |
Zm00001d048723_P001 | Maize | mitochondrion | 65.78 | 65.53 |
TraesCS1B01G418900.1 | Wheat | mitochondrion | 64.64 | 65.13 |
TraesCS5B01G028300.1 | Wheat | plastid | 65.02 | 65.02 |
TraesCS5B01G310100.1 | Wheat | peroxisome | 64.26 | 64.75 |
TraesCS1D01G398800.1 | Wheat | mitochondrion | 64.26 | 64.75 |
TraesCS4D01G309300.1 | Wheat | cytosol, peroxisome, plastid | 64.64 | 64.64 |
TraesCS5D01G530100.1 | Wheat | peroxisome | 63.88 | 64.62 |
TraesCS5B01G531600.1 | Wheat | mitochondrion | 63.88 | 64.62 |
TraesCS5D01G316400.1 | Wheat | cytosol, peroxisome, plastid | 63.88 | 64.37 |
TraesCS3B01G435100.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 68.06 | 64.16 |
TraesCS5A01G029700.1 | Wheat | plastid | 63.88 | 63.88 |
TraesCS5B01G542200.1 | Wheat | cytosol, peroxisome, plastid | 63.88 | 63.88 |
TraesCS1D01G398900.1 | Wheat | peroxisome | 43.35 | 63.69 |
TraesCS2D01G497300.1 | Wheat | cytosol, peroxisome, plastid | 63.5 | 63.5 |
HORVU1Hr1G086200.3 | Barley | peroxisome, plastid | 64.64 | 63.43 |
TraesCS2A01G497100.1 | Wheat | golgi, peroxisome, plastid | 63.12 | 63.12 |
TraesCS5D01G545700.1 | Wheat | peroxisome | 63.12 | 63.12 |
TraesCS4A01G328000.1 | Wheat | cytosol, peroxisome, plastid | 63.12 | 63.12 |
HORVU1Hr1G086190.1 | Barley | peroxisome | 46.01 | 62.37 |
TraesCS5D01G037500.1 | Wheat | plastid | 61.98 | 61.98 |
TraesCS4A01G343100.1 | Wheat | cytosol, peroxisome, plastid | 42.59 | 61.54 |
TraesCS2B01G525400.1 | Wheat | endoplasmic reticulum, peroxisome, plastid | 62.36 | 60.74 |
TraesCS1A01G390800.1 | Wheat | mitochondrion, plastid | 64.64 | 60.71 |
HORVU3Hr1G090170.2 | Barley | mitochondrion, plastid | 70.34 | 60.26 |
Zm00001d048726_P001 | Maize | cytosol | 50.95 | 59.82 |
TraesCS1B01G410300.1 | Wheat | peroxisome | 68.44 | 58.82 |
TraesCS5B01G542100.1 | Wheat | plastid | 31.56 | 58.45 |
Zm00001d011930_P001 | Maize | mitochondrion, plastid | 61.98 | 58.21 |
HORVU5Hr1G007770.4 | Barley | peroxisome | 60.46 | 57.4 |
HORVU5Hr1G122860.4 | Barley | nucleus, peroxisome, plastid | 61.22 | 57.3 |
HORVU0Hr1G027400.1 | Barley | peroxisome | 42.59 | 55.72 |
GSMUA_Achr9P03470_001 | Banana | cytosol | 54.75 | 53.53 |
TraesCS4A01G327900.1 | Wheat | mitochondrion, plastid | 64.64 | 52.8 |
GSMUA_Achr11P... | Banana | cytosol | 52.47 | 51.49 |
GSMUA_Achr9P03430_001 | Banana | cytosol, mitochondrion, plastid | 50.19 | 50.38 |
Zm00001d028575_P001 | Maize | extracellular | 51.71 | 49.82 |
GSMUA_Achr9P03440_001 | Banana | cytosol | 49.81 | 48.34 |
GSMUA_Achr9P03420_001 | Banana | mitochondrion | 53.61 | 46.84 |
GSMUA_Achr5P04560_001 | Banana | cytosol | 55.13 | 42.03 |
CDY35991 | Canola | plastid | 19.01 | 40.32 |
Bra029705.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 23.57 | 38.04 |
GSMUA_Achr6P34030_001 | Banana | cytosol | 49.43 | 35.91 |
Zm00001d019439_P001 | Maize | extracellular | 30.8 | 32.02 |
GSMUA_Achr9P03450_001 | Banana | cytosol, nucleus, peroxisome | 54.37 | 30.36 |
Zm00001d038897_P001 | Maize | peroxisome | 30.42 | 28.67 |
Zm00001d026290_P001 | Maize | peroxisome | 29.66 | 26.17 |
GSMUA_Achr10P... | Banana | cytosol | 52.85 | 25.79 |
Zm00001d002332_P026 | Maize | peroxisome | 28.9 | 25.59 |
Zm00001d006796_P001 | Maize | extracellular | 30.04 | 22.07 |
Protein Annotations
EntrezGene:100273624 | Gene3D:3.40.50.720 | MapMan:50.1.1 | UniProt:B4FFM6 | EMBL:BT035914 | EMBL:BT041520 |
EMBL:BT042999 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | ProteinID:ONM27337.1 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 |
ScanProsite:PS00061 | PANTHER:PTHR42898 | PANTHER:PTHR42898:SF1 | InterPro:SDR_fam | SMART:SM00822 | SUPFAM:SSF51735 |
InterPro:Sc_DH/Rdtase_CS | UniParc:UPI00017B7225 | EnsemblPlantsGene:Zm00001d007687 | EnsemblPlants:Zm00001d007687_P001 | EnsemblPlants:Zm00001d007687_T001 | SEG:seg |
Description
Tropinone reductase homolog
Coordinates
chr2:+:237421455..237422773
Molecular Weight (calculated)
27789.7 Da
IEP (calculated)
6.274
GRAVY (calculated)
0.229
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPGGSGERW SLAGATALVT GGSKGIGQAV VEELARLGAR VHTCARSAAD LEECRRRWAE KGLRVTVSVC DVAVRADRER LVLDTVSAAF DGKLDILVNN
101: AALLLLKPAA EWAAEDYARI MATNLESCLH ISQLAHPLLL NASVAGGASI VNVSSIASVL GFPQEVMYSV TKGGLNQMTR SLAVEWACDR IRVNCVAPGV
201: IMTDMGKELP AALVEQERSR IPLRRTGEPE EVASLVSFLC MPAASYVTGQ VIFVDGGRTI SGA
101: AALLLLKPAA EWAAEDYARI MATNLESCLH ISQLAHPLLL NASVAGGASI VNVSSIASVL GFPQEVMYSV TKGGLNQMTR SLAVEWACDR IRVNCVAPGV
201: IMTDMGKELP AALVEQERSR IPLRRTGEPE EVASLVSFLC MPAASYVTGQ VIFVDGGRTI SGA
001: METDKRWSLA GKTALVTGGT RGIGRAVVEE LAKFGAKVHT CSRNQEELNA CLNDWKANGL VVSGSVCDAS VRDQREKLIQ EASSAFSGKL NILINNVGTN
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP
Arabidopsis Description
Tropinone reductase homolog At5g06060 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHT0]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.