Factsheet for Zm00001d048726_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G434900.1	Wheat	cytosol, mitochondrion, plastid	29.02	73.86
TraesCS1B01G419000.1	Wheat	mitochondrion, plastid	51.34	63.19
EES10195	Sorghum	mitochondrion	70.09	59.47
HORVU1Hr1G086190.1	Barley	peroxisome	51.34	59.28
KXG29038	Sorghum	mitochondrion, plastid	69.64	59.09
HORVU0Hr1G027400.1	Barley	peroxisome	48.66	54.23
Zm00001d048723_P001	Maize	mitochondrion	61.61	52.27
TraesCS3A01G401900.1	Wheat	extracellular, mitochondrion, plastid	60.71	51.71
TraesCS3D01G396800.1	Wheat	extracellular, mitochondrion, plastid	60.27	51.33
TraesCS5B01G542200.1	Wheat	cytosol, peroxisome, plastid	59.82	50.95
Zm00001d007687_P001	Maize	extracellular	59.82	50.95
TraesCS4D01G309300.1	Wheat	cytosol, peroxisome, plastid	59.82	50.95
TraesCS4A01G328000.1	Wheat	cytosol, peroxisome, plastid	59.82	50.95
TraesCS1A01G383700.1	Wheat	cytosol, extracellular, plastid	34.38	50.66
HORVU1Hr1G084560.2	Barley	extracellular, mitochondrion, plastid	59.38	50.57
TraesCS2D01G497300.1	Wheat	cytosol, peroxisome, plastid	58.93	50.19
TraesCS2A01G497100.1	Wheat	golgi, peroxisome, plastid	58.93	50.19
TraesCS5D01G545700.1	Wheat	peroxisome	58.93	50.19
TraesCS3D01G396900.1	Wheat	mitochondrion, plastid	58.93	50.19
TraesCS5D01G545800.1	Wheat	cytosol, mitochondrion, plastid	58.48	49.62
TraesCS5D01G530100.1	Wheat	peroxisome	57.59	49.62
TraesCS5D01G316400.1	Wheat	cytosol, peroxisome, plastid	57.59	49.43
TraesCS5A01G029700.1	Wheat	plastid	57.59	49.05
TraesCS1D01G398800.1	Wheat	mitochondrion	57.14	49.04
TraesCS3A01G402000.1	Wheat	mitochondrion, plastid	57.14	48.67
TraesCS5B01G310100.1	Wheat	peroxisome	56.7	48.66
TraesCS1B01G418900.1	Wheat	mitochondrion	56.7	48.66
TraesCS1A01G390900.1	Wheat	mitochondrion, plastid	56.25	48.65
TraesCS5B01G531600.1	Wheat	mitochondrion	56.25	48.46
TraesCS5D01G037500.1	Wheat	plastid	56.7	48.29
TraesCS5B01G531800.1	Wheat	cytosol, peroxisome, plastid	54.91	48.24
TraesCS2B01G525400.1	Wheat	endoplasmic reticulum, peroxisome, plastid	58.04	48.15
TraesCS3B01G435100.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	59.82	48.03
TraesCS5B01G028300.1	Wheat	plastid	55.8	47.53
HORVU1Hr1G086200.3	Barley	peroxisome, plastid	56.7	47.39
TraesCS1A01G390800.1	Wheat	mitochondrion, plastid	56.7	45.36
HORVU5Hr1G122860.4	Barley	nucleus, peroxisome, plastid	55.8	44.48
HORVU3Hr1G090170.2	Barley	mitochondrion, plastid	60.71	44.3
TraesCS1B01G410300.1	Wheat	peroxisome	58.93	43.14
Zm00001d011930_P001	Maize	mitochondrion, plastid	50.45	40.36
TraesCS4A01G327900.1	Wheat	mitochondrion, plastid	57.59	40.06
GSMUA_Achr9P03470_001	Banana	cytosol	47.77	39.78
HORVU5Hr1G007770.4	Barley	peroxisome	48.66	39.35
TraesCS1D01G398900.1	Wheat	peroxisome	30.36	37.99
Zm00001d028575_P001	Maize	extracellular	45.98	37.73
GSMUA_Achr11P...	Banana	cytosol	45.09	37.69
TraesCS4A01G343100.1	Wheat	cytosol, peroxisome, plastid	29.91	36.81
GSMUA_Achr9P03430_001	Banana	cytosol, mitochondrion, plastid	42.86	36.64
GSMUA_Achr9P03440_001	Banana	cytosol	43.3	35.79
GSMUA_Achr9P03420_001	Banana	mitochondrion	45.09	33.55
GSMUA_Achr5P04560_001	Banana	cytosol	47.77	31.01
TraesCS5B01G542100.1	Wheat	plastid	18.3	28.87
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	19.64	26.99
GSMUA_Achr6P34030_001	Banana	cytosol	42.41	26.24
Zm00001d019439_P001	Maize	extracellular	29.02	25.69
Zm00001d038897_P001	Maize	peroxisome	29.02	23.3
GSMUA_Achr9P03450_001	Banana	cytosol, nucleus, peroxisome	47.32	22.51
CDY35991	Canola	plastid	11.16	20.16
Zm00001d026290_P001	Maize	peroxisome	24.55	18.46
Zm00001d002332_P026	Maize	peroxisome	24.11	18.18
GSMUA_Achr10P...	Banana	cytosol	42.86	17.81
Zm00001d006796_P001	Maize	extracellular	23.21	14.53

Protein Annotations

EnsemblPlants:Zm00001d048726_P001	EnsemblPlants:Zm00001d048726_T001	EnsemblPlantsGene:Zm00001d048726	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR42898	PANTHER:PTHR42898:SF1	PFAM:PF00106	PRINTS:PR00081	ProteinID:AQK48691.1	SUPFAM:SSF51735
UniParc:UPI0008452705	UniProt:A0A1D6PPC4	MapMan:50.1.1	:	:	:

Description

Tropinone reductase 2

Coordinates

chr4:+:4312488..4315879

Molecular Weight (calculated)

23873.6 Da

IEP (calculated)

8.502

GRAVY (calculated)

-0.043

Length

224 amino acids

Sequence
(BLAST)

001: MAAAERDRER WILPGATALV TGGSKGIGHA IVEELAALGA RVHTCSRNAA ELEECRRRWA EKGGGLLQQV TVSVCDVAVR ADREALMATV RDVFGGKLDI
101: LVNNAAQVVF KPAVECTGEE YTRIMATNLE SCFHLSQLAH PLLRDASLAG GGSVVHISST AGLLGFRGAV LYSTAKGISI EVHSIDVYKA RGPLARHEAR
201: YFSTARARHD TTRIEASPGS ARPG

Best Arabidopsis Sequence Match ( AT2G29350.2 )
(BLAST)

001: MAKEGGLGEN SRWSLGGMTA LVTGGSKGIG EAVVEELAML GAKVHTCARD ETQLQERLRE WQAKGFQVTT SVCDVSSRDQ RVKLMETVSS LYQGKLNILV
101: NNVGTSIFKP TTEYTAEDFS FVMATNLESA FHLSQLAHPL LKASGSGSIV LISSAAGVVH VNVGSIYGAT KGAMNQLARN LACEWASDNI RTNSVCPWYI
201: TTPLSNDVRP KFIFLLRTMK NKKNT

Arabidopsis Description

SAG13SAG13 [Source:UniProtKB/TrEMBL;Acc:A0A178VTS8]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.