Factsheet for HORVU5Hr1G122860.4

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus

Predictor Summary:

peroxisome 1
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, peroxisome, plastid
Any Predictor:	nucleus, peroxisome, plastid
MultiLoc:	peroxisome
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G545800.1	Wheat	cytosol, mitochondrion, plastid	82.21	87.5
TraesCS5B01G542100.1	Wheat	plastid	40.93	80.99
TraesCS4A01G327900.1	Wheat	mitochondrion, plastid	81.49	71.12
HORVU1Hr1G086190.1	Barley	peroxisome	48.75	70.62
HORVU0Hr1G027400.1	Barley	peroxisome	50.18	70.15
HORVU1Hr1G086200.3	Barley	peroxisome, plastid	62.99	66.04
EES10195	Sorghum	mitochondrion	59.07	62.88
KXG29038	Sorghum	mitochondrion, plastid	58.36	62.12
EES10198	Sorghum	mitochondrion, plastid	59.79	61.99
KXG29040	Sorghum	cytosol, peroxisome, plastid	53.38	61.98
HORVU1Hr1G084560.2	Barley	extracellular, mitochondrion, plastid	57.65	61.6
Zm00001d007687_P001	Maize	extracellular	57.3	61.22
Zm00001d048726_P001	Maize	cytosol	44.48	55.8
HORVU5Hr1G007770.4	Barley	peroxisome	54.8	55.6
HORVU2Hr1G091780.5	Barley	mitochondrion, plastid	53.38	55.56
HORVU3Hr1G090170.2	Barley	mitochondrion, plastid	60.5	55.37
HORVU3Hr1G097180.1	Barley	peroxisome, plastid	53.38	54.15
GSMUA_Achr11P...	Banana	cytosol	49.47	51.87
GSMUA_Achr9P03470_001	Banana	cytosol	49.47	51.67
HORVU4Hr1G060350.3	Barley	plastid	48.75	50.37
GSMUA_Achr9P03440_001	Banana	cytosol	46.62	48.34
GSMUA_Achr9P03430_001	Banana	cytosol, mitochondrion, plastid	44.84	48.09
GSMUA_Achr9P03420_001	Banana	mitochondrion	44.48	41.53
GSMUA_Achr5P04560_001	Banana	cytosol	49.82	40.58
HORVU4Hr1G060330.1	Barley	mitochondrion	42.35	37.19
GSMUA_Achr6P34030_001	Banana	cytosol	47.69	37.02
CDY35991	Canola	plastid	16.01	36.29
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	21.0	36.2
HORVU0Hr1G012410.1	Barley	peroxisome	31.67	35.18
GSMUA_Achr9P03450_001	Banana	cytosol, nucleus, peroxisome	49.47	29.51
GSMUA_Achr10P...	Banana	cytosol	48.04	25.05
HORVU5Hr1G049670.1	Barley	peroxisome	22.42	24.9
HORVU2Hr1G098920.1	Barley	peroxisome	25.27	23.75
HORVU1Hr1G018140.5	Barley	extracellular, mitochondrion	26.69	18.8

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	UniProt:A0A287T0H2	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:HORVU5Hr1G122860	EnsemblPlants:HORVU5Hr1G122860.4	InterPro:NAD(P)-bd_dom_sf
PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR42898	PANTHER:PTHR42898:SF1
InterPro:SDR_fam	SMART:SM00822	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	UniParc:UPI000B481AAE	SEG:seg

Description

No Description!

Coordinates

chrchr5H:-:662973482..662997733

Molecular Weight (calculated)

30434.3 Da

IEP (calculated)

8.026

GRAVY (calculated)

-0.232

Length

281 amino acids

Sequence
(BLAST)

001: MAVAGCGSRE ERWSLADATA LVTGGSKGIG YAIVEELAGF GARVHTCSRN AAELEECRRR WEQKNLRVTV SVCDVSVRAE REKLMETVRQ TFDSKLDILV
101: NNAGQFSFKP AAECTADDFS NLMTTNLEAS FHLSQLAHPL LMHASISGGG SIINMSSIGG SIAFAGSTIY AITKGALNQL TRNLATEWAT DMIRVNGIAA
201: GFVTTDMIKD VDPEYMKEEH SKTPLGRTGK PVEIASAVSF LCMPAASFIT GQGGDVEPGR RHRARHRRHQ RDRTCHRGGA C

Best Arabidopsis Sequence Match ( AT1G07440.1 )
(BLAST)

001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG

Arabidopsis Description

Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.