Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G209900.1 | Wheat | peroxisome | 74.69 | 88.52 |
| TraesCS4A01G094500.1 | Wheat | cytosol, peroxisome, plastid | 74.06 | 87.45 |
| TraesCS4D01G210700.1 | Wheat | plastid | 75.31 | 76.03 |
| HORVU4Hr1G060350.3 | Barley | plastid | 61.25 | 72.06 |
| Os03t0269100-02 | Rice | mitochondrion, plastid | 67.5 | 70.13 |
| GSMUA_Achr10P... | Banana | cytosol | 57.5 | 67.9 |
| AT5G06060.1 | Thale cress | peroxisome | 54.06 | 65.53 |
| CDY04975 | Canola | mitochondrion | 22.81 | 65.18 |
| VIT_13s0019g02180.t01 | Wine grape | peroxisome, plasma membrane, plastid | 54.38 | 64.93 |
| CDY14094 | Canola | peroxisome | 52.81 | 64.26 |
| CDY04977 | Canola | peroxisome | 52.5 | 63.88 |
| Solyc03g096640.2.1 | Tomato | mitochondrion, plastid | 53.12 | 63.43 |
| Bra028744.1-P | Field mustard | cytosol | 51.88 | 63.12 |
| PGSC0003DMT400043159 | Potato | mitochondrion | 52.81 | 62.83 |
| CDX98899 | Canola | peroxisome | 51.25 | 62.6 |
| EES08074 | Sorghum | plastid | 55.62 | 59.14 |
| CDX70101 | Canola | peroxisome | 48.12 | 58.78 |
| VIT_13s0019g02130.t01 | Wine grape | peroxisome | 49.06 | 58.58 |
| Solyc03g096660.1.1 | Tomato | extracellular | 35.62 | 58.46 |
| Bra009159.1-P | Field mustard | cytosol, mitochondrion, peroxisome, plasma membrane | 47.81 | 58.4 |
| VIT_13s0019g02140.t01 | Wine grape | peroxisome | 49.38 | 58.3 |
| KRH31007 | Soybean | mitochondrion | 49.06 | 57.93 |
| KRG97856 | Soybean | mitochondrion, plastid | 48.12 | 56.62 |
| PGSC0003DMT400043152 | Potato | peroxisome | 48.44 | 55.96 |
| KRH31025 | Soybean | plastid | 47.5 | 54.87 |
| KRG97870 | Soybean | mitochondrion | 42.81 | 54.8 |
| KRH31026 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 46.25 | 54.41 |
| VIT_13s0019g02170.t01 | Wine grape | mitochondrion, nucleus, peroxisome, plastid | 46.56 | 52.28 |
| KRG97857 | Soybean | mitochondrion | 40.0 | 51.2 |
| KRH31021 | Soybean | mitochondrion | 46.88 | 49.51 |
| HORVU1Hr1G086200.3 | Barley | peroxisome, plastid | 40.94 | 48.88 |
| HORVU1Hr1G084560.2 | Barley | extracellular, mitochondrion, plastid | 38.75 | 47.15 |
| HORVU3Hr1G097180.1 | Barley | peroxisome, plastid | 40.0 | 46.21 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 44.69 | 46.13 |
| HORVU5Hr1G007770.4 | Barley | peroxisome | 38.75 | 44.77 |
| HORVU1Hr1G086190.1 | Barley | peroxisome | 26.25 | 43.3 |
| HORVU5Hr1G122860.4 | Barley | nucleus, peroxisome, plastid | 37.19 | 42.35 |
| HORVU2Hr1G091780.5 | Barley | mitochondrion, plastid | 35.0 | 41.48 |
| HORVU3Hr1G090170.2 | Barley | mitochondrion, plastid | 39.69 | 41.37 |
| HORVU0Hr1G027400.1 | Barley | peroxisome | 25.0 | 39.8 |
| HORVU0Hr1G012410.1 | Barley | peroxisome | 24.38 | 30.83 |
| HORVU5Hr1G049670.1 | Barley | peroxisome | 19.06 | 24.11 |
| HORVU2Hr1G098920.1 | Barley | peroxisome | 18.44 | 19.73 |
| HORVU1Hr1G018140.5 | Barley | extracellular, mitochondrion | 20.31 | 16.29 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:50.1.1 | UniProt:A0A287P8Y9 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 |
| EnsemblPlantsGene:HORVU4Hr1G060330 | EnsemblPlants:HORVU4Hr1G060330.1 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 |
| ScanProsite:PS00061 | PANTHER:PTHR42898 | PANTHER:PTHR42898:SF14 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS |
| TMHMM:TMhelix | UniParc:UPI000B480DC0 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:506665230..506669472
Molecular Weight (calculated)
35536.9 Da
IEP (calculated)
10.311
GRAVY (calculated)
-0.285
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MLAEISRAVR TTLFQLGSTR SGGDGRGRRH RRQCGEVVPP RQDGARHRRH PRHRVRSARR PFFPISSRPH MVLSCRRLVY RRAVVEELAA LGAAVHTCSR
101: KEAELGERLK EWEAKGFRVT GSVCDVSVRG QRELLLRDVA DRFAGKLDIL INNVGTNRRK PTTEYSADEY SFIMATNLES AYHLCQLAHP LLKASAVASI
201: VFISSVSGVV AISSGSIYGM TKGAMNQLAK NLACEWAKDN IRINSVAPWY IKTSLVEEDL AKKDFVDTIA RRTPMRRVGE PEEVSSLVAF LCMPGSSYIT
301: GQTISVDGGM TINGMYPTEN
101: KEAELGERLK EWEAKGFRVT GSVCDVSVRG QRELLLRDVA DRFAGKLDIL INNVGTNRRK PTTEYSADEY SFIMATNLES AYHLCQLAHP LLKASAVASI
201: VFISSVSGVV AISSGSIYGM TKGAMNQLAK NLACEWAKDN IRINSVAPWY IKTSLVEEDL AKKDFVDTIA RRTPMRRVGE PEEVSSLVAF LCMPGSSYIT
301: GQTISVDGGM TINGMYPTEN
001: METDKRWSLA GKTALVTGGT RGIGRAVVEE LAKFGAKVHT CSRNQEELNA CLNDWKANGL VVSGSVCDAS VRDQREKLIQ EASSAFSGKL NILINNVGTN
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP
Arabidopsis Description
Tropinone reductase homolog At5g06060 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHT0]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.