Factsheet for Bra028744.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra018400.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G06060.1	Bra018400.1-P	AT2G29330.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04977	Canola	peroxisome	97.72	97.72
AT5G06060.1	Thale cress	peroxisome	88.97	88.64
Bra009159.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	82.89	83.21
Solyc03g096640.2.1	Tomato	mitochondrion, plastid	70.72	69.4
VIT_13s0019g02180.t01	Wine grape	peroxisome, plasma membrane, plastid	69.96	68.66
PGSC0003DMT400043159	Potato	mitochondrion	69.58	68.03
GSMUA_Achr10P...	Banana	cytosol	69.58	67.53
HORVU4Hr1G060350.3	Barley	plastid	69.2	66.91
TraesCS4A01G094400.1	Wheat	plastid	68.44	66.18
TraesCS4D01G210800.1	Wheat	plastid	68.06	65.81
TraesCS4B01G210000.1	Wheat	plastid	68.06	65.81
TraesCS4A01G094500.1	Wheat	cytosol, peroxisome, plastid	66.92	64.94
Bra031575.1-P	Field mustard	plastid	64.26	64.5
Zm00001d028575_P001	Maize	extracellular	66.92	64.47
TraesCS4B01G209900.1	Wheat	peroxisome	66.16	64.44
KRH31007	Soybean	mitochondrion	66.16	64.21
Bra030683.1-P	Field mustard	cytosol, mitochondrion, plastid	63.88	64.12
Os03t0268900-02	Rice	plastid	65.78	64.07
Bra018404.1-P	Field mustard	cytosol	44.87	63.44
Bra018400.1-P	Field mustard	cytosol, nucleus, plastid	63.12	63.36
KRG97856	Soybean	mitochondrion, plastid	65.4	63.24
KRH31026	Soybean	cytosol, mitochondrion, peroxisome, plastid	65.02	62.87
Bra039967.1-P	Field mustard	plastid	62.36	62.6
Solyc03g096660.1.1	Tomato	extracellular	46.39	62.56
Bra015580.1-P	Field mustard	mitochondrion	63.12	62.41
Bra039513.1-P	Field mustard	peroxisome	61.98	62.21
Os03t0269000-01	Rice	plastid	50.19	61.97
KRH31025	Soybean	plastid	65.02	61.73
VIT_13s0019g02130.t01	Wine grape	peroxisome	62.74	61.57
Bra000477.1-P	Field mustard	plastid	61.22	61.45
Bra039514.1-P	Field mustard	cytosol, peroxisome, plastid	61.22	61.45
Bra039973.1-P	Field mustard	plastid	61.22	61.45
PGSC0003DMT400043152	Potato	peroxisome	64.64	61.37
Bra000476.1-P	Field mustard	cytosol, peroxisome, plastid	60.84	61.07
Bra039971.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	60.84	61.07
VIT_13s0019g02140.t01	Wine grape	peroxisome	62.74	60.89
Bra018393.1-P	Field mustard	cytosol	60.08	60.31
Bra018402.1-P	Field mustard	cytosol	50.19	60.27
Bra027962.1-P	Field mustard	cytosol	39.54	60.12
Bra018391.1-P	Field mustard	cytosol	59.7	59.92
Bra039755.1-P	Field mustard	mitochondrion	60.46	59.77
KRG97870	Soybean	mitochondrion	56.65	59.6
Bra039977.1-P	Field mustard	plastid	43.73	59.59
Bra018396.1-P	Field mustard	cytosol	59.32	59.54
Bra018399.1-P	Field mustard	cytosol, peroxisome, plastid	59.32	59.54
Bra018405.1-P	Field mustard	cytosol	59.32	59.54
Bra039974.1-P	Field mustard	cytosol, plasma membrane, plastid	59.32	59.32
Bra039969.1-P	Field mustard	cytosol	58.56	58.56
Bra039976.1-P	Field mustard	cytosol	60.08	58.3
Bra018401.1-P	Field mustard	cytosol	55.89	58.1
KRG97857	Soybean	mitochondrion	54.75	57.6
OQU92858	Sorghum	cytosol, peroxisome, plastid	65.78	56.17
Os03t0269100-02	Rice	mitochondrion, plastid	65.78	56.17
TraesCS4D01G210700.1	Wheat	plastid	67.68	56.15
EES08074	Sorghum	plastid	64.26	56.15
KRH31021	Soybean	mitochondrion	63.88	55.45
VIT_13s0019g02170.t01	Wine grape	mitochondrion, nucleus, peroxisome, plastid	59.32	54.74
Bra039966.1-P	Field mustard	cytosol	57.79	52.78
HORVU4Hr1G060330.1	Barley	mitochondrion	63.12	51.88
Bra027961.1-P	Field mustard	cytosol	52.47	45.54
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	25.48	41.1
OQU91956	Sorghum	extracellular, peroxisome	49.43	40.62
Bra029476.1-P	Field mustard	peroxisome	33.46	34.51
Bra020854.1-P	Field mustard	cytosol, mitochondrion, peroxisome	31.18	31.91
Bra021324.1-P	Field mustard	cytosol	30.04	27.34
Bra001471.1-P	Field mustard	peroxisome	26.24	23.15
Bra034728.1-P	Field mustard	cytosol	25.86	23.13

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	EnsemblPlantsGene:Bra028744	EnsemblPlants:Bra028744.1	EnsemblPlants:Bra028744.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	UniProt:M4EIX9
InterPro:NAD(P)-bd_dom_sf	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR42898
PANTHER:PTHR42898:SF3	InterPro:SDR_fam	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	UniParc:UPI0002543175	SEG:seg

Description

AT5G06060 (E=2e-124) | tropinone reductase, putative / tropine dehydrogenase, putative

Coordinates

chrA02:-:2270067..2271610

Molecular Weight (calculated)

28257.7 Da

IEP (calculated)

7.371

GRAVY (calculated)

0.012

Length

263 amino acids

Sequence
(BLAST)

001: MENNDKRWSL AGKTALVTGG TRGIGRAVVE ELARFGATVH TCSRSQEELK SCLDDWKSNG LVITGSVCDA SVRDQRENLI QEVSSVFSGK INILVNNVGT
101: NLRKPTVEYT SEDYAKIMST NLESAFHFSQ IAHPLLKASG VGSIVFISSV AGLVHLSSGS VYGATKGALN QLTRNLACEW AGDNIRTNCV APWYIKTSLV
201: KPLLEKKGFE EAIVSRTPLG RVGEPEEVSS LVAFLCLPAA SYITGQVISV DGGFTVNGFS YTM

Best Arabidopsis Sequence Match ( AT5G06060.1 )
(BLAST)

001: METDKRWSLA GKTALVTGGT RGIGRAVVEE LAKFGAKVHT CSRNQEELNA CLNDWKANGL VVSGSVCDAS VRDQREKLIQ EASSAFSGKL NILINNVGTN
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP

Arabidopsis Description

Tropinone reductase homolog At5g06060 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHT0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.