Factsheet for Bra034728.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	peroxisome
PTS1:	peroxisome
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08402	Canola	cytosol	100.0	100.0
Bra001471.1-P	Field mustard	peroxisome	89.8	88.59
AT3G12800.1	Thale cress	peroxisome	88.78	87.58
KRH13054	Soybean	nucleus	82.31	81.21
VIT_19s0085g00500.t01	Wine grape	peroxisome	81.97	81.14
KRH44885	Soybean	nucleus	80.61	79.53
PGSC0003DMT400056868	Potato	cytosol, peroxisome, plastid	44.56	76.61
Solyc07g066630.2.1	Tomato	plastid	77.55	76.25
GSMUA_Achr3P23590_001	Banana	peroxisome	76.87	76.09
GSMUA_Achr2P01480_001	Banana	peroxisome	74.15	73.4
VIT_01s0011g01520.t01	Wine grape	peroxisome	74.15	73.4
Os04t0614000-01	Rice	cytosol	72.45	71.24
TraesCS2D01G418900.1	Wheat	peroxisome	71.77	70.57
TraesCS2B01G441000.1	Wheat	peroxisome	71.43	70.23
EES11416	Sorghum	mitochondrion, peroxisome, plastid	70.75	70.03
TraesCS2A01G422500.1	Wheat	golgi, peroxisome	71.09	69.9
HORVU2Hr1G098920.1	Barley	peroxisome	71.09	69.9
Zm00001d026290_P001	Maize	peroxisome	70.41	69.46
EES11417	Sorghum	peroxisome	70.07	69.36
Zm00001d002332_P026	Maize	peroxisome	68.37	67.68
Bra029476.1-P	Field mustard	peroxisome	24.49	28.24
Bra018404.1-P	Field mustard	cytosol	17.69	27.96
Bra021324.1-P	Field mustard	cytosol	27.21	27.68
Bra018405.1-P	Field mustard	cytosol	24.15	27.1
Bra009159.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	24.15	27.1
Bra018401.1-P	Field mustard	cytosol	23.13	26.88
Bra015580.1-P	Field mustard	mitochondrion	24.15	26.69
Bra039969.1-P	Field mustard	cytosol	23.47	26.24
Bra039514.1-P	Field mustard	cytosol, peroxisome, plastid	23.13	25.95
Bra039755.1-P	Field mustard	mitochondrion	23.47	25.94
Bra028744.1-P	Field mustard	cytosol	23.13	25.86
Bra000476.1-P	Field mustard	cytosol, peroxisome, plastid	22.79	25.57
Bra018399.1-P	Field mustard	cytosol, peroxisome, plastid	22.79	25.57
Bra039967.1-P	Field mustard	plastid	22.79	25.57
Bra018402.1-P	Field mustard	cytosol	19.05	25.57
Bra020854.1-P	Field mustard	cytosol, mitochondrion, peroxisome	22.11	25.29
Bra000477.1-P	Field mustard	plastid	22.45	25.19
Bra039974.1-P	Field mustard	cytosol, plasma membrane, plastid	22.45	25.1
Bra039977.1-P	Field mustard	plastid	16.33	24.87
Bra018391.1-P	Field mustard	cytosol	22.11	24.81
Bra031575.1-P	Field mustard	plastid	21.77	24.43
Bra030683.1-P	Field mustard	cytosol, mitochondrion, plastid	21.77	24.43
Bra039973.1-P	Field mustard	plastid	21.77	24.43
Bra018396.1-P	Field mustard	cytosol	21.77	24.43
Bra027962.1-P	Field mustard	cytosol	14.29	24.28
Bra039513.1-P	Field mustard	peroxisome	21.43	24.05
Bra018400.1-P	Field mustard	cytosol, nucleus, plastid	21.43	24.05
Bra018393.1-P	Field mustard	cytosol	21.43	24.05
Bra039976.1-P	Field mustard	cytosol	21.43	23.25
Bra039971.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.41	22.9
Bra039966.1-P	Field mustard	cytosol	20.75	21.18
Bra027961.1-P	Field mustard	cytosol	19.39	18.81
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	8.84	15.95

Protein Annotations

EnsemblPlants:Bra034728.1	EnsemblPlants:Bra034728.1-P	EnsemblPlantsGene:Bra034728	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR43296	PANTHER:PTHR43296:SF1	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	SEG:seg
SUPFAM:SSF51735	UniParc:UPI0002548186	UniProt:M4F0Y3	MapMan:5.7.3.5.3	:	:

Description

AT3G12800 (E=6e-110) SDRB, DECR | SDRB (SHORT-CHAIN DEHYDROGENASE-REDUCTASE B); binding / catalytic/ oxidoreductase

Coordinates

chrA05:+:21189899..21191126

Molecular Weight (calculated)

31351.6 Da

IEP (calculated)

9.442

GRAVY (calculated)

-0.170

Length

294 amino acids

Sequence
(BLAST)

001: MDSPFKPDVL KGKVALITGG GSGIGFEISS QFGKHGASIA IMGRRKQVLD AAVSDLRSLG IPAVGFEGDV RKPEDARRVV ESTFNHFGKV DILVNAAAGN
101: FLAAAEDLST NGFRTVLDID AVGTFNMCRE ALKYLKKGGP GRDASSGGGS ILNISATLHY TASWYQIHVS AAKAAVDAAT RNLALEWGTD YEIRVNGIAP
201: GPIGGTPGMS KLGPDEIENK AGDYIPLYKL GEKWDIAMAA LYLSCDSGKY VNGLTMVVDN GQWLSRPRHL PKEAVKELSR VVEKRSRAKP TSKL

Best Arabidopsis Sequence Match ( AT3G12800.1 )
(BLAST)

001: MDSPFKPDVV RGQVALITGG GSGIGFEISS QFGKHGASIA IMGRRKQVLD DAVSALRSLG IQAIGLEGDV RKQEDARRVV EATFQHFGKL DILVNAAAGN
101: FLAAAEDLSP NGFRTVLDID AVGTFNMCHA ALKYLKKGAP GRDSSSGGGS IINISATLHY TASWYQIHVS AAKAAVDATT RNLALEWGTD YDIRVNGIAP
201: GPIGGTPGMS KLVPEEIENK TREYMPLYKV GEKWDIAMAA LYLSCDSGKY VSGLTMVVDG GLWLSKPRHL PKEAVKQLSR AVEKRSRAKP VGLPTSKL

Arabidopsis Description

SDRBUncharacterized protein At3g12790 [Source:UniProtKB/TrEMBL;Acc:Q0WMN4]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.