Factsheet for Bra000477.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83306	Canola	plastid	100.0	100.0
CDX95753	Canola	cytosol, peroxisome, plastid	98.09	98.09
Bra039513.1-P	Field mustard	peroxisome	84.35	84.35
Bra039967.1-P	Field mustard	plastid	83.21	83.21
Bra039973.1-P	Field mustard	plastid	82.82	82.82
Bra018405.1-P	Field mustard	cytosol	82.82	82.82
Bra039514.1-P	Field mustard	cytosol, peroxisome, plastid	82.44	82.44
Bra018399.1-P	Field mustard	cytosol, peroxisome, plastid	82.44	82.44
Bra000476.1-P	Field mustard	cytosol, peroxisome, plastid	82.06	82.06
Bra018404.1-P	Field mustard	cytosol	58.02	81.72
Bra039971.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	81.3	81.3
Bra018402.1-P	Field mustard	cytosol	67.94	81.28
Bra018401.1-P	Field mustard	cytosol	77.86	80.63
Bra018391.1-P	Field mustard	cytosol	79.01	79.01
Bra018393.1-P	Field mustard	cytosol	78.24	78.24
Bra018396.1-P	Field mustard	cytosol	77.48	77.48
Bra039974.1-P	Field mustard	cytosol, plasma membrane, plastid	76.72	76.43
Bra039969.1-P	Field mustard	cytosol	76.72	76.43
Bra018400.1-P	Field mustard	cytosol, nucleus, plastid	76.34	76.34
Bra031575.1-P	Field mustard	plastid	71.76	71.76
Bra030683.1-P	Field mustard	cytosol, mitochondrion, plastid	67.56	67.56
Bra039966.1-P	Field mustard	cytosol	74.05	67.36
Bra015580.1-P	Field mustard	mitochondrion	66.03	65.04
Bra027962.1-P	Field mustard	cytosol	41.6	63.01
Bra039755.1-P	Field mustard	mitochondrion	63.74	62.78
Solyc03g096650.1.1	Tomato	cytosol	20.99	61.8
Bra028744.1-P	Field mustard	cytosol	61.45	61.22
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	58.78	61.11
VIT_06s0004g05380.t01	Wine grape	plastid	61.83	60.0
KRH24731	Soybean	nucleus	61.07	59.93
Bra009159.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	59.92	59.92
Bra039976.1-P	Field mustard	cytosol	61.83	59.78
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	60.69	59.11
KRH24733	Soybean	nucleus	59.54	58.87
VIT_06s0004g05400.t01	Wine grape	cytosol	24.81	58.56
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	60.31	58.52
Bra039977.1-P	Field mustard	plastid	42.75	58.03
VIT_06s0004g05330.t01	Wine grape	peroxisome	55.34	57.09
VIT_06s0004g05370.t01	Wine grape	peroxisome	54.58	56.75
VIT_06s0004g05310.t01	Wine grape	cytosol	24.43	56.64
VIT_06s0004g05440.t01	Wine grape	cytosol	17.56	56.1
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	48.09	52.5
VIT_06s0004g05450.t01	Wine grape	plasma membrane	34.73	50.56
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	47.33	50.41
Bra027961.1-P	Field mustard	cytosol	58.02	50.16
KRH29740	Soybean	cytosol	18.7	50.0
GSMUA_Achr5P04570_001	Banana	cytosol	20.99	43.31
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	26.34	42.33
Bra029476.1-P	Field mustard	peroxisome	29.39	30.2
Bra020854.1-P	Field mustard	cytosol, mitochondrion, peroxisome	29.01	29.57
Bra021324.1-P	Field mustard	cytosol	28.24	25.61
Bra034728.1-P	Field mustard	cytosol	25.19	22.45
Bra001471.1-P	Field mustard	peroxisome	25.19	22.15

Protein Annotations

EnsemblPlants:Bra000477.1	EnsemblPlants:Bra000477.1-P	EnsemblPlantsGene:Bra000477	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR42898	PANTHER:PTHR42898:SF7	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	SUPFAM:SSF51735
UniParc:UPI000253FFA4	UniProt:M4C8E9	MapMan:50.1.1	:	:	:

Description

AT2G29310 (E=5e-131) | tropinone reductase, putative / tropine dehydrogenase, putative

Coordinates

chrA03:+:11292091..11293245

Molecular Weight (calculated)

28193.6 Da

IEP (calculated)

6.659

GRAVY (calculated)

0.084

Length

262 amino acids

Sequence
(BLAST)

001: MDKRWSLQGM TALVTGGASG VGYAIVEELA SFGARIHVCD ISETFLNQSL SEWEKKGFQV SGSICDVTSR PQRETLIQKV SALFDGKLNI LVNNVGVLRG
101: KPTTEYVAED FTFHISTNLE PAFHFSQLSH PLLKASGYGS IIFISSVAGI VSVDCGSIYG LTKGALNQLT RNLACEWAKD GIRSNAVSPN VIRTPLSQSY
201: LDNVGYKEGL FNRTPLGRAA EPNDVASLVV FLCLPAASYI TGQTICVDGG FTVNGFSYQP HA

Best Arabidopsis Sequence Match ( AT2G29310.1 )
(BLAST)

001: MDKRWSLQGM TALVTGAASG IGYAIVEELA SFGAIIHICD ISETLLSQSL SEWEKKGFQV SGSICDVASR PDREKLMQTV SSLFDGKLNI LVNNVGVIRG
101: KPTTEYVAED FSYHISTNLE PAFHFSQLSH LLLKASGFGS IVFMSSATGV VSVQCGSIYS LTKGALNQLT RNLACEWAKD GIRANAVAPN VVKTPLSQSY
201: LEDVGFKEAL FSRTPLGRAG EPNEVASLVV FLCLPAASYI TGQTICIDGG FTVNAFSYKP QA

Arabidopsis Description

Tropinone reductase homolog At2g29310 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW14]
SUBAcon: [extracellular,cytosol,peroxisome,golgi,plasma membrane,vacuole,endoplasmic reticulum,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.