Factsheet for Bra039513.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000476.1-P
Bra039514.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G29320.1	Bra000476.1-P	AT2G29310.1	21798944
AT2G29320.1	Bra039514.1-P	AT2G29310.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83307	Canola	peroxisome	98.86	98.86
AT2G29320.1	Thale cress	mitochondrion	87.4	85.13
Bra039973.1-P	Field mustard	plastid	85.11	85.11
Bra000477.1-P	Field mustard	plastid	84.35	84.35
Bra039967.1-P	Field mustard	plastid	84.35	84.35
Bra039514.1-P	Field mustard	cytosol, peroxisome, plastid	83.59	83.59
Bra018405.1-P	Field mustard	cytosol	83.59	83.59
Bra000476.1-P	Field mustard	cytosol, peroxisome, plastid	83.21	83.21
Bra039971.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	83.21	83.21
Bra018399.1-P	Field mustard	cytosol, peroxisome, plastid	83.21	83.21
Bra018404.1-P	Field mustard	cytosol	58.02	81.72
Bra018402.1-P	Field mustard	cytosol	67.94	81.28
Bra018401.1-P	Field mustard	cytosol	77.1	79.84
Bra018393.1-P	Field mustard	cytosol	78.24	78.24
AT2G29300.2	Thale cress	extracellular	84.35	77.27
Bra018396.1-P	Field mustard	cytosol	77.1	77.1
Bra018391.1-P	Field mustard	cytosol	77.1	77.1
Bra018400.1-P	Field mustard	cytosol, nucleus, plastid	76.72	76.72
Bra039974.1-P	Field mustard	cytosol, plasma membrane, plastid	75.95	75.67
Bra039969.1-P	Field mustard	cytosol	75.57	75.29
Bra030683.1-P	Field mustard	cytosol, mitochondrion, plastid	68.32	68.32
Bra031575.1-P	Field mustard	plastid	68.32	68.32
Bra039966.1-P	Field mustard	cytosol	74.43	67.71
Bra015580.1-P	Field mustard	mitochondrion	67.18	66.17
Bra039755.1-P	Field mustard	mitochondrion	65.27	64.29
Bra027962.1-P	Field mustard	cytosol	42.37	64.16
Solyc03g096650.1.1	Tomato	cytosol	21.76	64.04
Bra028744.1-P	Field mustard	cytosol	62.21	61.98
Bra009159.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	61.07	61.07
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	57.63	59.92
VIT_06s0004g05370.t01	Wine grape	peroxisome	57.25	59.52
VIT_06s0004g05400.t01	Wine grape	cytosol	25.19	59.46
Bra039976.1-P	Field mustard	cytosol	61.45	59.41
KRH24733	Soybean	nucleus	59.92	59.25
KRH24731	Soybean	nucleus	60.31	59.18
VIT_06s0004g05380.t01	Wine grape	plastid	60.69	58.89
VIT_06s0004g05440.t01	Wine grape	cytosol	18.32	58.54
VIT_06s0004g05310.t01	Wine grape	cytosol	24.81	57.52
Bra039977.1-P	Field mustard	plastid	42.37	57.51
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	58.78	57.25
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	58.78	57.04
VIT_06s0004g05330.t01	Wine grape	peroxisome	54.58	56.3
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	49.62	54.17
KRH29740	Soybean	cytosol	19.08	51.02
Bra027961.1-P	Field mustard	cytosol	58.4	50.49
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	46.95	50.0
VIT_06s0004g05450.t01	Wine grape	plasma membrane	33.59	48.89
GSMUA_Achr5P04570_001	Banana	cytosol	22.14	45.67
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	27.86	44.79
Bra029476.1-P	Field mustard	peroxisome	30.15	30.98
Bra020854.1-P	Field mustard	cytosol, mitochondrion, peroxisome	29.39	29.96
Bra021324.1-P	Field mustard	cytosol	27.86	25.26
Bra034728.1-P	Field mustard	cytosol	24.05	21.43
Bra001471.1-P	Field mustard	peroxisome	23.66	20.81

Protein Annotations

EnsemblPlants:Bra039513.1	EnsemblPlants:Bra039513.1-P	EnsemblPlantsGene:Bra039513	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
InterPro:Sc_DH/Rdtase_CS	PANTHER:PTHR42898	PANTHER:PTHR42898:SF7	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081
ScanProsite:PS00061	SUPFAM:SSF51735	UniParc:UPI000253E9A9	UniProt:M4FEJ2	MapMan:50.1.1	:

Description

AT2G29320 (E=5e-126) | tropinone reductase, putative / tropine dehydrogenase, putative

Coordinates

chrScaffold000167:-:105068..106236

Molecular Weight (calculated)

28188.6 Da

IEP (calculated)

6.743

GRAVY (calculated)

0.078

Length

262 amino acids

Sequence
(BLAST)

001: MDKRWSLQGM TALVTGGASG IGYAIVEELA NFGAKIHVCD ISETLLNQSL SEWEKKGFQV KGSVCDVTSR SERETLIQNV SSLFDGKLNI LVNNVGVLRG
101: KPTIEYVAED FAYHSSTNLE AAFHFGQLSY PLLKASGYGS IVFLSSVAGV VSFECGSIYG VTKGALNQLA RNLACEWAKD GIRANAVAPN VVKTRQSQSY
201: LEDVSFKEKL FCRTPLGRAG EPNEVASLVV FLCLPAASYI TGQTICVDGG LTVNGFSYQS RA

Best Arabidopsis Sequence Match ( AT2G29320.1 )
(BLAST)

001: MVTRKMDKRL WSLQGMTALV TGAASGIGYA IVEELAGFGA KIHICDISKT LLNQSLSEWE NKGFQVSGSV CDVTSHPERE KLMQTVSSIF DGKLNILVNN
101: VGVLRGKPTT EYVADDFTFH ISTNLEAAYH FCQLSHPLLK ASGYGSIVFL SSVAGVVSLI DCGSIYGLTK GALNQLARNL ACEWAKDGIR ANAVAPNVVK
201: TAQSQSFLED VSKKEGLLSR TPLGRVGEPN EVSSLVVFLC LPAASYITGQ TICVDGGLTV NGFSYQPHA

Arabidopsis Description

Tropinone reductase homolog At2g29320 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW15]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.