Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G29320.1 | Thale cress | mitochondrion | 82.52 | 87.73 |
| CDX83307 | Canola | peroxisome | 77.27 | 84.35 |
| Bra039513.1-P | Field mustard | peroxisome | 77.27 | 84.35 |
| CDX95751 | Canola | peroxisome | 76.57 | 83.59 |
| AT2G29310.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 75.87 | 82.82 |
| AT2G29330.1 | Thale cress | cytosol, peroxisome, plastid | 69.58 | 76.54 |
| AT2G30670.1 | Thale cress | cytosol, nucleus, peroxisome | 69.58 | 75.95 |
| AT2G29340.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 74.13 | 69.06 |
| AT1G07450.1 | Thale cress | cytosol, nucleus, peroxisome | 61.89 | 68.08 |
| AT1G07440.1 | Thale cress | mitochondrion | 59.44 | 63.91 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 17.83 | 62.2 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 24.13 | 62.16 |
| AT2G29370.1 | Thale cress | peroxisome | 58.04 | 61.94 |
| Solyc03g096650.1.1 | Tomato | cytosol | 19.23 | 61.8 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 54.2 | 61.51 |
| AT2G29290.2 | Thale cress | plastid | 55.94 | 61.07 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 23.78 | 60.18 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 52.8 | 59.92 |
| AT2G29350.1 | Thale cress | plastid | 56.29 | 59.85 |
| AT2G29360.1 | Thale cress | cytosol | 56.29 | 59.41 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 55.24 | 58.52 |
| AT2G29150.1 | Thale cress | peroxisome | 54.55 | 58.21 |
| KRH24731 | Soybean | nucleus | 54.2 | 58.05 |
| AT2G29170.1 | Thale cress | cytosol | 21.68 | 57.94 |
| AT5G06060.1 | Thale cress | peroxisome | 52.8 | 57.2 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 53.85 | 57.04 |
| KRH24733 | Soybean | nucleus | 52.8 | 56.98 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 47.2 | 56.25 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 49.65 | 55.91 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 51.75 | 55.02 |
| KRH29740 | Soybean | cytosol | 17.48 | 51.02 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 43.01 | 50.0 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 20.28 | 45.67 |
| AT2G29260.1 | Thale cress | plastid | 51.05 | 45.34 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 27.97 | 44.44 |
| AT4G05530.1 | Thale cress | peroxisome | 26.57 | 29.92 |
| AT3G05260.1 | Thale cress | cytosol | 24.83 | 24.57 |
| AT2G07640.1 | Thale cress | mitochondrion | 11.89 | 21.79 |
| AT3G12800.1 | Thale cress | peroxisome | 22.38 | 21.48 |
| AT1G54870.2 | Thale cress | plastid | 24.48 | 20.77 |
| AT1G36580.1 | Thale cress | nucleus | 12.94 | 18.97 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:50.1.1 | EntrezGene:817479 | ProteinID:AEC08231.1 | ArrayExpress:AT2G29300 | EnsemblPlantsGene:AT2G29300 |
| RefSeq:AT2G29300 | TAIR:AT2G29300 | RefSeq:AT2G29300-TAIR-G | EnsemblPlants:AT2G29300.2 | TAIR:AT2G29300.2 | Unigene:At.38494 |
| UniProt:F4IKL5 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_001189631.1 | PFAM:PF13561 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009031 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PRINTS:PR00080 | PRINTS:PR00081 | PANTHER:PTHR42898 | PANTHER:PTHR42898:SF7 | InterPro:SDR_fam |
| SUPFAM:SSF51735 | UniParc:UPI0001E92D61 | : | : | : | : |
Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IKL5]
Coordinates
chr2:+:12588191..12589759
Molecular Weight (calculated)
31298.6 Da
IEP (calculated)
7.878
GRAVY (calculated)
0.147
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKRWSLQGM TALVTGAASG IGYAIVEELA GFGARIHVCD ISETLLNQSL REWEKKGFQV SGSVCDVTSR PEREKLMQTV SSLFDGKLNI LVNNVGVLRA
101: KPTTEYVADD FTFHISTNLE AAYHFCQLSH PLLKTSGYGS IVFLSSVSGV VSITDCGSLY GLTKGALNQL ARNLACEWAK DGIRANAVAP NVVKTAQSQF
201: FLQDVSKKEG LFSRTPLGRS GEPNEVASLV VFLCLPAASY ITGQTICIDG GLTYYFICLV KLSFSNYCNL CVYIWINVIS TRWNQR
101: KPTTEYVADD FTFHISTNLE AAYHFCQLSH PLLKTSGYGS IVFLSSVSGV VSITDCGSLY GLTKGALNQL ARNLACEWAK DGIRANAVAP NVVKTAQSQF
201: FLQDVSKKEG LFSRTPLGRS GEPNEVASLV VFLCLPAASY ITGQTICIDG GLTYYFICLV KLSFSNYCNL CVYIWINVIS TRWNQR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.