Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015580.1-P | Field mustard | mitochondrion | 83.83 | 83.83 |
| CDY14610 | Canola | mitochondrion | 83.83 | 83.83 |
| CDY10276 | Canola | mitochondrion | 83.83 | 83.83 |
| CDY06706 | Canola | mitochondrion | 83.83 | 83.83 |
| AT2G29330.1 | Thale cress | cytosol, peroxisome, plastid | 69.92 | 71.54 |
| AT2G30670.1 | Thale cress | cytosol, nucleus, peroxisome | 67.67 | 68.7 |
| AT2G29310.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 66.92 | 67.94 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 20.68 | 67.07 |
| AT2G29290.2 | Thale cress | plastid | 65.79 | 66.79 |
| AT2G29320.1 | Thale cress | mitochondrion | 67.29 | 66.54 |
| AT1G07450.1 | Thale cress | cytosol, nucleus, peroxisome | 65.04 | 66.54 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 62.03 | 65.48 |
| AT2G29350.1 | Thale cress | plastid | 66.17 | 65.43 |
| KRH24731 | Soybean | nucleus | 65.04 | 64.79 |
| AT5G06060.1 | Thale cress | peroxisome | 64.29 | 64.77 |
| AT2G29360.1 | Thale cress | cytosol | 65.79 | 64.58 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 26.69 | 63.96 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 64.66 | 63.7 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 60.15 | 63.49 |
| AT2G29370.1 | Thale cress | peroxisome | 63.53 | 63.06 |
| AT2G29150.1 | Thale cress | peroxisome | 63.53 | 63.06 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 26.69 | 62.83 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 63.53 | 62.59 |
| Solyc03g096650.1.1 | Tomato | cytosol | 20.68 | 61.8 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 58.65 | 61.42 |
| AT2G29340.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 70.3 | 60.91 |
| KRH24733 | Soybean | nucleus | 60.53 | 60.75 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 60.9 | 60.22 |
| AT2G29300.2 | Thale cress | extracellular | 63.91 | 59.44 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 51.88 | 57.5 |
| KRH29740 | Soybean | cytosol | 21.05 | 57.14 |
| AT2G29170.1 | Thale cress | cytosol | 22.93 | 57.01 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 26.69 | 55.91 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 50.75 | 54.88 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 36.84 | 54.44 |
| AT2G29260.1 | Thale cress | plastid | 59.02 | 48.76 |
| AT4G05530.1 | Thale cress | peroxisome | 31.58 | 33.07 |
| AT3G05260.1 | Thale cress | cytosol | 28.2 | 25.95 |
| AT2G07640.1 | Thale cress | mitochondrion | 14.66 | 25.0 |
| AT3G12800.1 | Thale cress | peroxisome | 27.07 | 24.16 |
| AT1G54870.2 | Thale cress | plastid | 28.95 | 22.85 |
| AT1G36580.1 | Thale cress | nucleus | 14.29 | 19.49 |
Protein Annotations
| PDB:1XQ1 | PDB:2Q45 | Gene3D:3.40.50.720 | MapMan:50.1.1 | EntrezGene:837256 | UniProt:A0A178WGL5 |
| ProteinID:AAF79553.1 | ProteinID:AEE28125.1 | EMBL:AF361621 | ArrayExpress:AT1G07440 | EnsemblPlantsGene:AT1G07440 | RefSeq:AT1G07440 |
| TAIR:AT1G07440 | RefSeq:AT1G07440-TAIR-G | EnsemblPlants:AT1G07440.1 | TAIR:AT1G07440.1 | EMBL:AY055094 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf |
| RefSeq:NP_172224.1 | ProteinID:OAP16891.1 | UniProt:P0DKI3 | PFAM:PF13561 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00080 | PRINTS:PR00081 |
| ScanProsite:PS00061 | PANTHER:PTHR42898 | PANTHER:PTHR42898:SF7 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS |
| UniParc:UPI00000481F0 | SEG:seg | : | : | : | : |
Description
Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
Coordinates
chr1:-:2286185..2287791
Molecular Weight (calculated)
28333.9 Da
IEP (calculated)
6.993
GRAVY (calculated)
0.075
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.