Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 1
- peroxisome 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX95750 | Canola | cytosol | 84.7 | 82.85 |
| AT2G29170.1 | Thale cress | cytosol | 32.84 | 82.24 |
| AT2G29150.1 | Thale cress | peroxisome | 77.61 | 77.61 |
| AT2G29350.1 | Thale cress | plastid | 77.61 | 77.32 |
| AT2G29360.1 | Thale cress | cytosol | 77.24 | 76.38 |
| AT2G29290.2 | Thale cress | plastid | 74.25 | 75.95 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 27.99 | 67.57 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 63.43 | 67.46 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 63.06 | 67.06 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 27.99 | 66.37 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 20.15 | 65.85 |
| AT1G07450.1 | Thale cress | cytosol, nucleus, peroxisome | 63.81 | 65.77 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 64.93 | 64.44 |
| Solyc03g096650.1.1 | Tomato | cytosol | 21.27 | 64.04 |
| AT1G07440.1 | Thale cress | mitochondrion | 63.06 | 63.53 |
| AT2G29310.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 61.94 | 63.36 |
| AT5G06060.1 | Thale cress | peroxisome | 62.31 | 63.26 |
| AT2G29330.1 | Thale cress | cytosol, peroxisome, plastid | 61.19 | 63.08 |
| AT2G30670.1 | Thale cress | cytosol, nucleus, peroxisome | 61.57 | 62.98 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 63.43 | 62.96 |
| KRH24731 | Soybean | nucleus | 62.31 | 62.55 |
| AT2G29320.1 | Thale cress | mitochondrion | 62.69 | 62.45 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 58.58 | 61.81 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 54.85 | 61.25 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 60.45 | 60.22 |
| KRH24733 | Soybean | nucleus | 58.58 | 59.25 |
| AT2G29300.2 | Thale cress | extracellular | 61.94 | 58.04 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 51.12 | 55.69 |
| KRH29740 | Soybean | cytosol | 19.78 | 54.08 |
| AT2G29340.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 61.19 | 53.42 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 35.45 | 52.78 |
| AT2G29260.1 | Thale cress | plastid | 58.96 | 49.07 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 22.76 | 48.03 |
| AT4G05530.1 | Thale cress | peroxisome | 30.22 | 31.89 |
| AT3G05260.1 | Thale cress | cytosol | 27.24 | 25.26 |
| AT1G36580.1 | Thale cress | nucleus | 16.42 | 22.56 |
| AT3G12800.1 | Thale cress | peroxisome | 23.88 | 21.48 |
| AT1G54870.2 | Thale cress | plastid | 26.87 | 21.36 |
| AT2G07640.1 | Thale cress | mitochondrion | 12.31 | 21.15 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:50.1.1 | EntrezGene:817486 | UniProt:A0A178VVH1 | ProteinID:AAC95201.1 | ProteinID:AEC08243.1 |
| ArrayExpress:AT2G29370 | EnsemblPlantsGene:AT2G29370 | RefSeq:AT2G29370 | TAIR:AT2G29370 | RefSeq:AT2G29370-TAIR-G | EnsemblPlants:AT2G29370.1 |
| TAIR:AT2G29370.1 | Unigene:At.38487 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_850132.2 | ProteinID:OAP10387.1 |
| PFAM:PF13561 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PRINTS:PR00080 |
| PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR42898 | PANTHER:PTHR42898:SF7 | UniProt:Q9ZW20 | InterPro:SDR_fam |
| SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | UniParc:UPI00000A1093 | : | : | : |
Description
Tropinone reductase homolog At2g29370 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW20]
Coordinates
chr2:+:12606012..12607618
Molecular Weight (calculated)
28722.5 Da
IEP (calculated)
6.748
GRAVY (calculated)
0.006
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKRGESLRD KPKWSLEGMT ALVTGGSKGL GKAVVEELAM LGARVHTCAR DETQLQESLR EWQAKGLQVT TSVCDVSSRD QREKLMETVS SLFQGKLSIL
101: VPNVGIGVLK PTTECTAEEF SFIIATNLES TFHFSQLAHP LLKASGSGNI VLMSSVAGVV NLGNTSIYGA TKGAMNQLAR NLACEWASDN IRANSVCPWF
201: ITTPSTKDFL GDKDVKEKVE SVTPLRRVGE ANEVSSLVAF LCLPAASYIT GQTICVDGGF TINGFSLP
101: VPNVGIGVLK PTTECTAEEF SFIIATNLES TFHFSQLAHP LLKASGSGNI VLMSSVAGVV NLGNTSIYGA TKGAMNQLAR NLACEWASDN IRANSVCPWF
201: ITTPSTKDFL GDKDVKEKVE SVTPLRRVGE ANEVSSLVAF LCLPAASYIT GQTICVDGGF TINGFSLP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.