Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G29370.1 | Thale cress | peroxisome | 82.85 | 84.7 |
| CDY09824 | Canola | mitochondrion | 75.18 | 76.01 |
| CDX97893 | Canola | mitochondrion | 75.18 | 76.01 |
| CDY09823 | Canola | peroxisome | 73.72 | 74.54 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 72.99 | 73.8 |
| CDY72061 | Canola | cytosol | 29.2 | 73.39 |
| CDY51372 | Canola | plastid | 73.72 | 72.4 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 20.44 | 68.29 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 28.1 | 68.14 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 27.37 | 67.57 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 60.95 | 66.27 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 59.49 | 64.68 |
| CDY06706 | Canola | mitochondrion | 62.04 | 63.91 |
| CDY68057 | Canola | cytosol | 60.95 | 63.74 |
| CDY16437 | Canola | mitochondrion | 61.68 | 63.53 |
| CDX86486 | Canola | cytosol, peroxisome, plastid | 60.58 | 63.36 |
| CDX86485 | Canola | cytosol, peroxisome, plastid | 60.58 | 63.36 |
| CDY52942 | Canola | mitochondrion | 61.31 | 63.16 |
| CDY10276 | Canola | mitochondrion | 61.31 | 63.16 |
| CDY14610 | Canola | mitochondrion | 61.31 | 63.16 |
| Solyc03g096650.1.1 | Tomato | cytosol | 20.44 | 62.92 |
| CDY04977 | Canola | peroxisome | 60.22 | 62.74 |
| CDY09917 | Canola | cytosol | 59.85 | 62.6 |
| CDX98899 | Canola | peroxisome | 59.85 | 62.6 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 61.68 | 62.59 |
| CDY64214 | Canola | mitochondrion | 39.05 | 62.57 |
| CDY06260 | Canola | plastid | 59.49 | 62.21 |
| CDY14094 | Canola | peroxisome | 59.49 | 61.98 |
| CDX97899 | Canola | peroxisome | 59.12 | 61.83 |
| CDY04975 | Canola | mitochondrion | 25.18 | 61.61 |
| CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 58.76 | 61.45 |
| CDY40183 | Canola | plastid | 58.76 | 61.45 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 58.76 | 61.45 |
| CDY31768 | Canola | cytosol, peroxisome, plastid | 58.39 | 61.07 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 53.28 | 60.83 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 59.85 | 60.74 |
| CDY45434 | Canola | cytosol, nucleus, plastid | 58.03 | 60.69 |
| CDY45432 | Canola | cytosol | 58.03 | 60.69 |
| KRH24731 | Soybean | nucleus | 59.12 | 60.67 |
| CDY40179 | Canola | cytosol, peroxisome, plastid | 57.66 | 60.54 |
| CDX70101 | Canola | peroxisome | 57.66 | 60.31 |
| CDY45438 | Canola | cytosol | 57.3 | 59.92 |
| CDX83307 | Canola | peroxisome | 57.3 | 59.92 |
| CDX83306 | Canola | plastid | 57.3 | 59.92 |
| CDY40186 | Canola | cytosol | 45.26 | 59.9 |
| CDX97890 | Canola | cytosol | 73.72 | 59.59 |
| CDX95751 | Canola | peroxisome | 56.93 | 59.54 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 55.11 | 59.45 |
| CDY45441 | Canola | cytosol | 48.54 | 59.38 |
| CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 56.93 | 59.32 |
| CDY40175 | Canola | plasma membrane | 56.57 | 59.16 |
| CDY40165 | Canola | plastid | 56.57 | 59.16 |
| CDX95753 | Canola | cytosol, peroxisome, plastid | 56.57 | 59.16 |
| KRH24733 | Soybean | nucleus | 56.93 | 58.87 |
| CDY31774 | Canola | cytosol | 50.37 | 58.72 |
| CDY40182 | Canola | cytosol, peroxisome, plastid | 55.84 | 58.4 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 57.3 | 58.36 |
| CDX97895 | Canola | cytosol | 50.0 | 58.3 |
| CDY45435 | Canola | cytosol, peroxisome, plastid | 55.47 | 58.02 |
| CDY40171 | Canola | cytosol | 46.72 | 57.92 |
| CDY40185 | Canola | plastid | 55.11 | 57.63 |
| CDY31773 | Canola | plastid | 55.11 | 57.63 |
| CDY16436 | Canola | endoplasmic reticulum, vacuole | 21.9 | 57.14 |
| CDX97897 | Canola | cytosol, extracellular | 47.08 | 55.84 |
| CDY45433 | Canola | cytosol | 48.54 | 54.29 |
| KRH29740 | Soybean | cytosol | 19.34 | 54.08 |
| CDY31770 | Canola | plastid | 45.62 | 53.88 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 48.18 | 53.66 |
| CDY35991 | Canola | plastid | 23.72 | 52.42 |
| CDX95752 | Canola | cytosol | 45.26 | 52.1 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 32.85 | 50.0 |
| CDY40177 | Canola | cytosol | 49.27 | 48.74 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 22.26 | 48.03 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 53.65 | 47.42 |
| CDY65683 | Canola | cytosol, mitochondrion | 58.76 | 40.35 |
| CDY35231 | Canola | peroxisome | 15.69 | 34.68 |
| CDX94534 | Canola | peroxisome | 29.2 | 31.37 |
| CDY16690 | Canola | peroxisome | 28.83 | 30.98 |
| CDY31767 | Canola | plastid | 60.95 | 29.66 |
| CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 27.74 | 29.57 |
| CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 27.74 | 29.46 |
| CDY43488 | Canola | cytosol | 26.28 | 24.91 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 26.28 | 24.91 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 25.55 | 24.39 |
| CDY50145 | Canola | plastid | 59.12 | 22.38 |
| CDY05152 | Canola | cytosol | 18.98 | 21.76 |
| CDY08402 | Canola | cytosol | 21.9 | 20.41 |
| CDY05153 | Canola | cytosol, nucleus, plastid | 5.11 | 20.0 |
| CDY00799 | Canola | peroxisome | 21.53 | 19.8 |
| CDX73802 | Canola | peroxisome | 21.53 | 19.8 |
Protein Annotations
| EnsemblPlants:CDX95750 | EnsemblPlantsGene:GSBRNA2T00101658001 | Gene3D:3.40.50.720 | GO:A0A078E1V4 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR42898 | PANTHER:PTHR42898:SF7 | PFAM:PF13561 | PRINTS:PR00081 | ProteinID:CDX95750 | ProteinID:CDX95750.1 |
| SUPFAM:SSF51735 | UniParc:UPI0004EF26FB | MapMan:50.1.1 | : | : | : |
Description
BnaC03g26310D
Coordinates
chrLK031890:-:1142553..1144184
Molecular Weight (calculated)
29426.5 Da
IEP (calculated)
6.984
GRAVY (calculated)
0.084
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKTMESLGD KPRWNLGGRT ALVTGGTKGL GEAVVKELAM LGARIHTCAR DETQLQESLH EWQAKGFQVT TSVCDVSSPD QREKLMETVS SVFQGKLNIF
101: VSNVGTGVVK PTIECTSEEF SFIMATNLES AFHLAQLAHP LLKASGSGNI VLMSSIAGVV NLSRTSIYGA TKGIHMRILK TLNQLGRNLA CEWASDNIRV
201: NSVCPWFITT PATKDFLCGE VKEKVESVTP MGRVGEANEV SSLVAFLCLP AASYITGQTI CVDGGFTING FSFP
101: VSNVGTGVVK PTIECTSEEF SFIMATNLES AFHLAQLAHP LLKASGSGNI VLMSSIAGVV NLSRTSIYGA TKGIHMRILK TLNQLGRNLA CEWASDNIRV
201: NSVCPWFITT PATKDFLCGE VKEKVESVTP MGRVGEANEV SSLVAFLCLP AASYITGQTI CVDGGFTING FSFP
001: MAKRGESLRD KPKWSLEGMT ALVTGGSKGL GKAVVEELAM LGARVHTCAR DETQLQESLR EWQAKGLQVT TSVCDVSSRD QREKLMETVS SLFQGKLSIL
101: VPNVGIGVLK PTTECTAEEF SFIIATNLES TFHFSQLAHP LLKASGSGNI VLMSSVAGVV NLGNTSIYGA TKGAMNQLAR NLACEWASDN IRANSVCPWF
201: ITTPSTKDFL GDKDVKEKVE SVTPLRRVGE ANEVSSLVAF LCLPAASYIT GQTICVDGGF TINGFSLP
101: VPNVGIGVLK PTTECTAEEF SFIIATNLES TFHFSQLAHP LLKASGSGNI VLMSSVAGVV NLGNTSIYGA TKGAMNQLAR NLACEWASDN IRANSVCPWF
201: ITTPSTKDFL GDKDVKEKVE SVTPLRRVGE ANEVSSLVAF LCLPAASYIT GQTICVDGGF TINGFSLP
Arabidopsis Description
Tropinone reductase homolog At2g29370 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW20]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.