Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45432 | Canola | cytosol | 97.33 | 97.33 |
| CDY40186 | Canola | cytosol | 75.57 | 95.65 |
| Bra018402.1-P | Field mustard | cytosol | 79.39 | 94.98 |
| CDY40185 | Canola | plastid | 87.4 | 87.4 |
| CDY31768 | Canola | cytosol, peroxisome, plastid | 85.5 | 85.5 |
| CDY45433 | Canola | cytosol | 79.39 | 84.9 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 84.73 | 84.73 |
| CDY31773 | Canola | plastid | 84.73 | 84.73 |
| CDX83307 | Canola | peroxisome | 84.35 | 84.35 |
| CDX95751 | Canola | peroxisome | 83.59 | 83.59 |
| CDX97897 | Canola | cytosol, extracellular | 73.66 | 83.55 |
| CDY40182 | Canola | cytosol, peroxisome, plastid | 83.21 | 83.21 |
| CDX97899 | Canola | peroxisome | 83.21 | 83.21 |
| CDX83306 | Canola | plastid | 82.44 | 82.44 |
| CDY45435 | Canola | cytosol, peroxisome, plastid | 82.06 | 82.06 |
| CDX95753 | Canola | cytosol, peroxisome, plastid | 81.68 | 81.68 |
| CDY40183 | Canola | plastid | 79.01 | 79.01 |
| CDY40175 | Canola | plasma membrane | 79.01 | 79.01 |
| CDY45434 | Canola | cytosol, nucleus, plastid | 79.01 | 79.01 |
| CDY45438 | Canola | cytosol | 78.24 | 78.24 |
| CDY40179 | Canola | cytosol, peroxisome, plastid | 77.48 | 77.78 |
| CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 76.72 | 76.43 |
| CDY40165 | Canola | plastid | 75.95 | 75.95 |
| CDY31774 | Canola | cytosol | 67.94 | 75.74 |
| CDY45441 | Canola | cytosol | 64.5 | 75.45 |
| CDX97895 | Canola | cytosol | 67.56 | 75.32 |
| CDY40171 | Canola | cytosol | 63.36 | 75.11 |
| CDX86486 | Canola | cytosol, peroxisome, plastid | 72.9 | 72.9 |
| CDY31770 | Canola | plastid | 62.98 | 71.12 |
| CDY68057 | Canola | cytosol | 70.99 | 70.99 |
| CDX95752 | Canola | cytosol | 63.74 | 70.17 |
| CDY06706 | Canola | mitochondrion | 70.23 | 69.17 |
| CDY10276 | Canola | mitochondrion | 70.23 | 69.17 |
| CDY14610 | Canola | mitochondrion | 70.23 | 69.17 |
| CDY09917 | Canola | cytosol | 69.08 | 69.08 |
| CDX86485 | Canola | cytosol, peroxisome, plastid | 67.94 | 67.94 |
| CDY06260 | Canola | plastid | 67.56 | 67.56 |
| CDY16437 | Canola | mitochondrion | 68.32 | 67.29 |
| CDY52942 | Canola | mitochondrion | 67.94 | 66.92 |
| CDY16436 | Canola | endoplasmic reticulum, vacuole | 26.34 | 65.71 |
| CDY64214 | Canola | mitochondrion | 41.98 | 64.33 |
| CDY40177 | Canola | cytosol | 67.56 | 63.9 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 60.31 | 62.7 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 60.31 | 62.7 |
| Solyc03g096650.1.1 | Tomato | cytosol | 20.99 | 61.8 |
| CDY04975 | Canola | mitochondrion | 26.34 | 61.61 |
| CDY04977 | Canola | peroxisome | 61.83 | 61.6 |
| CDX98899 | Canola | peroxisome | 61.45 | 61.45 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 25.95 | 61.26 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 19.08 | 60.98 |
| CDY14094 | Canola | peroxisome | 61.07 | 60.84 |
| CDX70101 | Canola | peroxisome | 60.69 | 60.69 |
| CDY09824 | Canola | mitochondrion | 62.6 | 60.52 |
| CDX97893 | Canola | mitochondrion | 62.6 | 60.52 |
| CDY09823 | Canola | peroxisome | 62.6 | 60.52 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 62.6 | 60.52 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 62.21 | 60.37 |
| KRH24733 | Soybean | nucleus | 60.69 | 60.0 |
| KRH24731 | Soybean | nucleus | 61.07 | 59.93 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 61.45 | 59.63 |
| CDX95750 | Canola | cytosol | 61.45 | 58.76 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 56.87 | 58.66 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 25.19 | 58.41 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 59.54 | 57.99 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 51.53 | 56.25 |
| CDY51372 | Canola | plastid | 59.54 | 55.91 |
| CDY35991 | Canola | plastid | 25.95 | 54.84 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 50.0 | 53.25 |
| CDY72061 | Canola | cytosol | 22.14 | 53.21 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 35.11 | 51.11 |
| KRH29740 | Soybean | cytosol | 19.08 | 51.02 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 56.49 | 47.74 |
| CDX97890 | Canola | cytosol | 60.69 | 46.9 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 22.14 | 45.67 |
| CDY65683 | Canola | cytosol, mitochondrion | 68.7 | 45.11 |
| CDY35231 | Canola | peroxisome | 16.79 | 35.48 |
| CDY31767 | Canola | plastid | 75.95 | 35.35 |
| CDY50145 | Canola | plastid | 85.88 | 31.08 |
| CDY16690 | Canola | peroxisome | 29.77 | 30.59 |
| CDX94534 | Canola | peroxisome | 29.77 | 30.59 |
| CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 29.01 | 29.57 |
| CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 29.01 | 29.46 |
| CDY43488 | Canola | cytosol | 29.39 | 26.64 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 28.24 | 25.78 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 28.24 | 25.61 |
| CDY08402 | Canola | cytosol | 27.48 | 24.49 |
| CDX73802 | Canola | peroxisome | 27.48 | 24.16 |
| CDY00799 | Canola | peroxisome | 27.48 | 24.16 |
| CDY05152 | Canola | cytosol | 21.76 | 23.85 |
| CDY05153 | Canola | cytosol, nucleus, plastid | 4.96 | 18.57 |
Protein Annotations
| EnsemblPlants:CDY40188 | EnsemblPlantsGene:GSBRNA2T00069326001 | Gene3D:3.40.50.720 | GO:A0A078HTW3 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR42898 | PANTHER:PTHR42898:SF7 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ProteinID:CDY40188 |
| ProteinID:CDY40188.1 | SUPFAM:SSF51735 | UniParc:UPI0004EEE7F4 | UniProt:A0A078HTW3 | MapMan:50.1.1 | : |
Description
BnaC04g14160DBnaC04g14160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HTW3]
Coordinates
chrLK032465:-:261365..262996
Molecular Weight (calculated)
28113.4 Da
IEP (calculated)
5.319
GRAVY (calculated)
0.036
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKRWSLQGT TALVTGGGSG IGYAIVEELA GFGAKIHVCD ISETLLNKSL SEWEKKGFKV SGSVCDVTSR PERETLMQTV SSLFNGKLDI FVNNVGGGRP
101: KPTTEYDADD FDFHIATNLE PAFHFCQLSH PLLKASGYGS IVFISSVAGV VFFECGSIYS LTKGALNQLA RNLACEWAKD SIRANAVAPN AIKTPLSQPY
201: LDDISFKEEL FGRTPLGRAG EPNEVASLVV FLCLPAASYI TGQTICVDGG LTVNGFSYQP HA
101: KPTTEYDADD FDFHIATNLE PAFHFCQLSH PLLKASGYGS IVFISSVAGV VFFECGSIYS LTKGALNQLA RNLACEWAKD SIRANAVAPN AIKTPLSQPY
201: LDDISFKEEL FGRTPLGRAG EPNEVASLVV FLCLPAASYI TGQTICVDGG LTVNGFSYQP HA
001: MDKRWSLQGM TALVTGAASG IGYAIVEELA GFGARIHVCD ISETLLNQSL REWEKKGFQV SGSVCDVTSR PEREKLMQTV SSLFDGKLNI LVNNVGVLRA
101: KPTTEYVADD FTFHISTNLE AAYHFCQLSH PLLKTSGYGS IVFLSSVSGV VSITDCGSLY GLTKGALNQL ARNLACEWAK DGIRANAVAP NVVKTAQSQF
201: FLQDVSKKEG LFSRTPLGRS GEPNEVASLV VFLCLPAASY ITGQTICIDG GLTVYGFSSQ PQA
101: KPTTEYVADD FTFHISTNLE AAYHFCQLSH PLLKTSGYGS IVFLSSVSGV VSITDCGSLY GLTKGALNQL ARNLACEWAK DGIRANAVAP NVVKTAQSQF
201: FLQDVSKKEG LFSRTPLGRS GEPNEVASLV VFLCLPAASY ITGQTICIDG GLTVYGFSSQ PQA
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IKL5]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.